SC-1

Germplasm Overview


Name	SC-1
Alias	CV-72 [view all 5]
GRIN ID	PI 529598
Type	Cultivar
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	CKR 421/PD4398
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 37]
SSR Genotype Data	[view all 101]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	CRS-19-410a

Alias


Synonym
CV-72
Pedigree-U510
PI 529598
SA 1544
SA-1544

Image


File Name	Legend	Dataset
SA-1544_CS13-0915_IMG_3085_BN.jpg	[SA-1544] boll showing nectaries, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3086_B.jpg	[SA-1544] green boll, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3087_B.jpg	[SA-1544] green boll, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3088_BO.jpg	[SA-1544] boll open, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7603_F.jpg	[SA-1544] flower, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7604_LB.jpg	[SA-1544] leaf close up of the back surface, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7605_FO.jpg	[SA-1544] flower open, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_MG_9160_L.jpg	[SA-1544] leaf, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)

Phenotypic Data

Total 37 trait scores

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#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, Before2006	lint color	white	Not Available
2	NCGC germplasm evaluation, CS13	boll color	green	US_TX_CS_2013	915
3	NCGC germplasm evaluation, CS13	boll gossypol glands	medium	US_TX_CS_2013	915
4	NCGC germplasm evaluation, CS13	boll nectaries	reduced	US_TX_CS_2013	915
5	NCGC germplasm evaluation, CS13	boll pitting	smooth	US_TX_CS_2013	915
6	NCGC germplasm evaluation, CS13	boll point	moderately pointed	US_TX_CS_2013	915
7	NCGC germplasm evaluation, CS13	boll shape	cone oval	US_TX_CS_2013	915
8	NCGC germplasm evaluation, CS13	boll size	medium	US_TX_CS_2013	915
9	NCGC germplasm evaluation, CS13	bract color	sun red	US_TX_CS_2013	915
10	NCGC germplasm evaluation, CS13	bract nectaries	present	US_TX_CS_2013	915
11	NCGC germplasm evaluation, CS13	bract teeth number	medium	US_TX_CS_2013	915
12	NCGC germplasm evaluation, CS13	bract teeth size	large	US_TX_CS_2013	915
13	NCGC germplasm evaluation, CS13	bract type	normal	US_TX_CS_2013	915
14	NCGC germplasm evaluation, CS13	canopy type	typical	US_TX_CS_2013	915
15	NCGC germplasm evaluation, CS13	fruiting type	normal	US_TX_CS_2013	915
16	NCGC germplasm evaluation, CS13	leaf color	green	US_TX_CS_2013	915
17	NCGC germplasm evaluation, CS13	leaf gossypol glands	medium	US_TX_CS_2013	915
18	NCGC germplasm evaluation, CS13	leaf shape	normal	US_TX_CS_2013	915
19	NCGC germplasm evaluation, CS13	leaf size	medium	US_TX_CS_2013	915
20	NCGC germplasm evaluation, CS13	lint color	white	US_TX_CS_2013	915
21	NCGC germplasm evaluation, CS13	petal color	cream	US_TX_CS_2013	915
22	NCGC germplasm evaluation, CS13	petal spot	none	US_TX_CS_2013	915
23	NCGC germplasm evaluation, CS13	photoperiod	open bolls	US_TX_CS_2013	915
24	NCGC germplasm evaluation, CS13	plant shape	normal	US_TX_CS_2013	915
25	NCGC germplasm evaluation, CS13	plot maturity	less than half open	US_TX_CS_2013	915

Page

Ssr Genotype Data

Total 101 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	Du_2005	BNL0409	genetic_marker	98	BNL0409_98
2	Du_2005	BNL0686	genetic_marker	165\|190	BNL0686_165; BNL0686_190
3	Du_2005	BNL1053	genetic_marker	175\|182	BNL1053_175; BNL1053_182
4	Du_2005	BNL1064	genetic_marker	141\|155	BNL1064_141; BNL1064_155
5	Du_2005	BNL1421	genetic_marker	250	BNL1421_250
6	Du_2005	BNL1666	genetic_marker	117\|137	BNL1666_117; BNL1666_137
7	Du_2005	BNL1672	genetic_marker	104\|134	BNL1672_104; BNL1672_134
8	Du_2005	CIR0026	genetic_marker	106	CIR0026_106
9	Du_2005	CIR0048	genetic_marker	125	CIR0048_125
10	Du_2005	CIR0068	genetic_marker	158	CIR0068_158
11	Du_2005	CIR0229	genetic_marker	296\|322	CIR0229_296; CIR0229_322
12	Du_2005	GH288	genetic_marker	140\|175	GH288_140; GH288_175
13	Du_2005	GH302	genetic_marker	280	GH302_280
14	Du_2005	GH345	genetic_marker	115\|70\|87	GH345_115; GH345_70; GH345_87
15	Du_2005	GH346	genetic_marker	120\|155\|175	GH346_120; GH346_155; GH346_175
16	Du_2005	GH349	genetic_marker	115	GH349_115
17	Du_2005	GH434	genetic_marker	140\|170	GH434_140; GH434_170
18	Du_2005	GH441	genetic_marker	150	GH441_150
19	Du_2005	GH470	genetic_marker	110\|130	GH470_110; GH470_130
20	Du_2005	GH523	genetic_marker	125\|138\|160	GH523_125; GH523_138; GH523_160
21	Du_2005	GH527	genetic_marker	125\|175	GH527_125; GH527_175
22	Du_2005	NAU2265	genetic_marker	220\|240	NAU2265_220; NAU2265_240
23	Du_2005	NAU2277	genetic_marker	135\|145	NAU2277_135; NAU2277_145
24	Du_2005	TMB0564	genetic_marker	202	TMB0564_202
25	Du_2005	TMB0703	genetic_marker	250\|300	TMB0703_250; TMB0703_300

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Publications


Year	Publication
1979	Culp TW, Harrell DC. Registration of SC‐1 Cotton (Reg. No. 72). Crop Science. 1979; 19(3):410.

Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	USDA_SNP63K_PD_genotype_2021	USDA_SNP0016	C/T	T
2	USDA_SNP63K_PD_genotype_2021	USDA_SNP0020	A/C	C
3	USDA_SNP63K_PD_genotype_2021	USDA_SNP0022	T/C	T
4	USDA_SNP63K_PD_genotype_2021	USDA_SNP0026	G/T	G
5	USDA_SNP63K_PD_genotype_2021	USDA_SNP0027	A/G	A
6	USDA_SNP63K_PD_genotype_2021	USDA_SNP0036	C/T	-
7	USDA_SNP63K_PD_genotype_2021	USDA_SNP0039	C/T	T
8	USDA_SNP63K_PD_genotype_2021	USDA_SNP0049	A/C	M
9	USDA_SNP63K_PD_genotype_2021	USDA_SNP0057	C/T	C
10	USDA_SNP63K_PD_genotype_2021	USDA_SNP0064	A/G	G
11	USDA_SNP63K_PD_genotype_2021	USDA_SNP0070	C/T	C
12	USDA_SNP63K_PD_genotype_2021	USDA_SNP0073	A/G	G
13	USDA_SNP63K_PD_genotype_2021	USDA_SNP0074	A/G	A
14	USDA_SNP63K_PD_genotype_2021	USDA_SNP0075	A/G	G
15	USDA_SNP63K_PD_genotype_2021	USDA_SNP0076	A/C	A
16	USDA_SNP63K_PD_genotype_2021	USDA_SNP0077	A/G	G
17	USDA_SNP63K_PD_genotype_2021	USDA_SNP0084	A/C	-
18	USDA_SNP63K_PD_genotype_2021	USDA_SNP0085	C/T	-
19	USDA_SNP63K_PD_genotype_2021	USDA_SNP0092	C/T	T
20	USDA_SNP63K_PD_genotype_2021	USDA_SNP0102	C/T	C
21	USDA_SNP63K_PD_genotype_2021	USDA_SNP0107	A/C	A
22	USDA_SNP63K_PD_genotype_2021	USDA_SNP0109	A/C	C
23	USDA_SNP63K_PD_genotype_2021	USDA_SNP0111	G/T	T
24	USDA_SNP63K_PD_genotype_2021	USDA_SNP0121	A/G	A
25	USDA_SNP63K_PD_genotype_2021	USDA_SNP0134	A/C	C

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Last

Cross References

External references for this accession


Database	Accession
GRIN_Regist	CV-72
COLL_Pedigree	Pedigree-U510
GRIN	PI 529598

In Collection

Name	ID used in Collection	External Database
Pedigrees of Upland and Pima Cultivars (v2005)	Pedigree-U510
NPGS Crop Science Registration (USA)	CV-72
GRIN NPGS Cotton Collection (USA)	PI 529598	GRIN:

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