Data Contributors

Contributor Institution Country Data (font green link to data) Year
Lin, Zhong-Xu Huazhong Agri. U. China Gossypium barbadense M210936 CDS and protein data 2024
Guo, Wang-Zhen Nanjing Agri. U. China The NAU SSR 1-8704 series data 2024
Yuan, Dao-Jun; Meng,Qing-Ying Huazhong Agri. U. China Genome assemblies and annotations of 12 Gossypium barbadense 2024
Liu, Fang CRI-CAAS China Kindly provide images of wild species for CottonGen use 2024
Xu, Yu-hui; Li, Xue-Yuan Xinjiang Academy of Agri. Sci. China Gossypium hirsutum 'Yuan Main 11' genome assembly and annotations 2024
Udall, Joshua A. USDA-ARS College Station, TX USA Gossypium hirsutum 'PSC355' genome assembly and annotation data 2023
Xu, Yan-ChaoLiu, Fang CRI-CAAS China Ggos(D6), Ghar(D2-2), Gtri(D8), and Gklo(D3-k) genome and annotations 2023
Xu, Yan-ChaoLiu, Fang CRI-CAAS China G.ekmanianum, G.stephensii, G.hirsutum genome and annotations 2023
Zhao, Tianlun; Zhu, Shui-Jin Zhejiang University China Gossypium bickii (G1) genome JZU_v1.0 2022
Xu, Zhenzhen; Shen, Xin-Lian Jiangsu Academy of Agri. Sci. China Gossypium anomalum genome assembly v1.2 and annotations a1.1 2022
Billings G; Hulse-Kemp A; Campbell T NCSU; USDA-ARS Florence, SC USA ARS_PD_SNP63K_genotyping_2021 2022
Udall, Joshua A. USDA-ARS College Station, TX USA Gossypium herbaceum (A1) 'Wagad' genome and annotation 2022
Udall, Joshua A. USDA-ARS College Station, TX USA Gossypium hirsutum B713 and Bar32 assembly and annotation 2022
He, Shoupu; Du, Xiongming CRI-CAAS China 3278 Genomes re-seq & map to ref. genome (He et al. 2021) 2021
Grover, Corrinne E Iowa State U USA Gossypium stocksii (E1) genome assembly and annotation 2021
Grover, Corrinne E; Udall, Joshua A. Iowa State U; USDA-ARS, CS, TX USA Gossypium anomalum (B1) genome and annotations 2021
Yang, Zhao-En; Li, Fu-Guang CRI-CAAS China G. thurberi and G. davidsonii genomes and annotations 2021
Ma, Zhi-Ying Hebei Agricultural University China NDM8 (Gh) and Pima90 (Gb) genomes and annotations 2021
Xu, Zhenzhen; Shen, Xin-Lian Jiangsu Academy of Agri. Sci. China JAAS 14332 G. raimondii transposable element (TE) sequences 2021
Udall, Joshua A. USDA-ARS, College Station, TX USA Gossypium stocksii genome assembly and annotations 2021
Shen, Xin-Lian Jiangsu Academy of Agri. Sci. China Gossypium anomalum genome assembly and annotations 2021
Zhang, Hong-Bin Teaxs A&M U. USA 474 cotton fiber length (GFL) genes 2021
Bourland, Freddie M. University of Arkansas, Keiser, AR USA Perspectives from 50 Years of Cotton Breeding (2020 CSES) 2020
David M. Goodstein; Jeremy Schmutz US DOE Joint Genome Institute USA G. hirsutum v2.1 (Phytozome id: 527) assembly and annotation 2020
Huang, Gai; Zhu, Yuxian; Yu, John Wuhan U. & USDA-ARS, CS, TX China & USA WHU-USDA A1-076, A2-SXY1 and AD1-TM1 genomes 2020
Grover, Corrinne E. Iowa State University, Ames, IA USA G. thurberi (D1) genome annotation data 2020
Grover, Corrinne E. Iowa State University, Ames, IA USA G. longicalyx (F1) genome assembly and annotation data 2020
Love, Janna USDA-ARS, College Station, TX USA NCGC germplasm - image charactorizations 2014-2017 2019
Liu, Fang CRI-CAAS China CRI assembly of G2 genome 2019
Udall, Joshua A. USDA-ARS, College Station, TX USA NSF new assembly of D5 genome 2019
Du, Xiong-Ming CRI-CAAS China Updated assembly of 'SXY1' A2 genome 2019
Yuan, Daojun; Wang, Maojun Huazhong Agri. U. China New assembly of HAU-AD1.v1.1 2019
Tianzhen, Zhang Zhejiang University China New assembly of TM-1 v2.1 and new Hai-7124 v1.1 2019
Liu,Quanyi, Li,Fuguang; Song,Guoli CRI-CAAS China Published articles from Journal of Cotton Research 2018
Udall, Joshua A. USDA-ARS, College Station, TX USA New genome sequences of Gossypioides kirkii and G. turneri 2018
Yuan, DaojunZhang, Xian-Long Huazhong Agri. U. China New genome sequences HAU-AD1.v1 and HAU-AD2.v2 2018
Frelichowski, James E. Jr. USDA-ARS, College Station, TX USA NCGC - character. scores 2015-2018 from TX and/or Costa Rica 2018
Udall, Joshua A. Brigham Young U. USA VCF data on AD1-JGI genome 2018
McCarty, Jack C. Jr. USDA-ARS, Mississippi State, MS USA 2018
Guo, Wang-Zhen Nanjing Agri. U. China NAU Cotton80KSNP Array data 2017
Stipanovic, Robert D. USDA-ARS, College Station, TX USA G. barbadense seed weight and total gossypol data 2017
Hulse-Kemp, Amanda U. of California, Davis, CA USA SNP63K chips genotypic data (~400 germplasm) 2016
Hulse-Kemp, Amanda; Stelly, David Texas A&M U. USA SNP63K chips genotypic data (inter and intra maps) 2016
Yuan, DaojunZhang, Xian-Long Huazhong Agri. U. China Syntenic block data 2016
Hulse-Kemp, Amanda; Stelly, David Texas A&M U. USA SNP63K inter-species Map - TM-1 x 3-79, F2 2016
Hulse-Kemp, Amanda; Stelly, David Texas A&M U. USA SNP63K intra-species Map - Phytogen 72 x Stoneville 474, F2 2016
Yuan, DaojunZhang, Xian-Long Huazhong Agri. U. China 3-79 genome barbadense sequence - HAU-SGI 2016
Hinze, Lori USDA-ARS, College Station, TX USA NCGC - SSR genotyping data and seed traits scores 2016
Percy, Richard USDA-ARS, College Station, TX USA Allotetraploid cotton mutant genes & morphological markers 2015
Cho, Seungho Monsanto USA SNP linked to genetic male sterility - MON_GH 2015
Frelichowski, James E. Jr. USDA-ARS, College Station, TX USA NCGC - charact. scores - ARS_CGRU_CS, Set -I 2015
Li, Fuguang; Lu, Cairui CRI-CAAS China TM-1 genome hirsutum sequence - CGP-BGI v1.0 2015
Zhang, Tian-Zhen Nanjing Agri. U. China TM-1 genome hirsutum sequence - NAU-NBI v1.1 2015
Carla Young; Pepper, Alan Texas A&M U. USA SNP GBS data - TAMU 2015
Hulse-Kemp, Amanda; Stelly, David Texas A&M U. USA SNP63K chips 70,000 (45, 667 "HulseKemp" - TAMU) 2014
Frelichowski, James E. Jr. USDA-ARS, College Station, TX USA NCGC Std. descriptors and rating scale - GRIN COT 2014
Fang, David D. USDA-ARS, New Orleans, LA USA SNP sequences 5,839 - USDA_CFB 2014
Cho, Seungho Monsanto USA SNP marker primers 96 and genetic map positions - MON_ 2014
Ashrafi, Hamid U. of California, Davis, CA USA TM-1 hybrid assembly data GMAPed to BGI-D5 and BGI-A2 2014
Lacape, Jean Marc CIRAD France SNP sequences 35,719 - CIR 2014
Udall, Joshua A. Brigham Young U. USA WGS data [BAM format] of 7 sp. mapped to JGI-D5 genome 2014
Li, Fuguang; Lu, Cairui CRI-CAAS China A2-genome arboreum sequence - BGI v2.0 2014
Zhu, Qian-Hao CSIRO Australia Map CSIRO_SNP Genetic 2014
Wilson, Iain CSIRO Australia SNP sequences 37413 SNP & 3090 RAD_SNP - CSIRO 2014
Gore, Michael A. Cornell U. USA SNP 491 sequences and genotyping data - Cornell 2014
Lin, Zhong-Xu Huazhong Agri. U. China SSR primers - 1,129 new HAU 2014
Love, Janna USDA-ARS, College Station, TX USA nearly 10,000 images of 1,270 germplasm 2013
Love, Janna USDA-ARS, College Station, TX USA over 12,000 images of 2075 germplasm 2013
Guo, Wang-Zhen Nanjing Agri. U. China SSR primers - NAU PPS updates - NAU 2013
Udall, Joshua A. Brigham Young U. USA Homeo-SNPs from A, D, and At/Dt genome 2013
Paterson, Andrew H. PGML U. Georgia USA D5-genome raimondii sequence - JGI v2.0 2013
Fang, David D. USDA-ARS, New Orleans, LA USA Map T3-RIL (2012) v2 2013
Wang, Kun-Bo CRI-CAAS China SSR primers - CCRI 2012
Guo, Wang-Zhen Nanjing Agri. U. China Map TH-BC1 (2012) 2012
Yu, Shu-Xun CRI-CAAS China D5-genome raimondii sequence - BGI v1.0 2012
Lacape, Jean Marc CIRAD France Map CIRAD-HDC 2012
Udall, Joshua A. Brigham Young U. USA Unigene Cotton46a Contigs 2012
Yu, John Z. USDA-ARS, College Station, TX USA Map T3-RIL (2012) 2012
Jena, Satya Narayan NBRI India SSR primers and sequences - NBRI 2012
Lin, Zhong-Xu Huazhong Agri. U. China Map E3-BC1 2011
Kumpatla, Siva Prasad Dow AgroSciences USA SSR primers and sequences - DOW 2011
Gore, Michael A. USDA-ARS, Maricopa, AZ USA Phenotyping TN-RIL 2011
Gore, Michael A. USDA-ARS, Maricopa, AZ USA Genotyping TN-RIL 2011
Zeng, Ling-He USDA-ARS, Stoneville, MS USA Association Map 2011
Lacape, Jean Marc CIRAD France Map GV-RIL 2010
Van Deynze, Allen U. of California, Davis, CA USA SNP primers and sequences -UCcg 2010
Xu, Zhan-You USDA-ARS, Texas A&M U. USA TM-1 FPC contigs (updates) 2009
Yu, Jing USDA-ARS, Texas A&M U. USA Map AD-ref 2009
Cantrell, Roy G.; Xiao, Jinhua Monsanto USA Map Monsanto SSR Bin 2009
Cantrell, Roy G.; Xiao, Jinhua Monsanto USA SSR primers and sequences 2009
CRI-CAAS CRI-CAAS China Reference - CNCTS  2008
Kohel, Russell J. USDA-ARS, College Station, TX USA Images - Cotton Mutation 2008
Kohel, Russell J. USDA-ARS, College Station, TX USA Reference - Cotton Literatures 2008
Du, Xiong-Ming CRI-CAAS China China Cotton Germplasm Collection 2008
Du, Xiong-Ming CRI-CAAS China Germplasm Evaluation - China 2008
Abdurakhmonov, Ibrokhim Y. Institute of Genetics and PEB Uzbekistan Germplasm Evaluation - UZ-PC-GRIN 2008
Abdurakhmonov, Ibrokhim Y. Institute of Genetics and PEB Uzbekistan Germplasm Collection - UZ-PC-GRIN 2008
Pepper, Alan E. Texas A&M U. USA SSR primers and sequences - Gh 2008
Scheffler, Brian E. USDA-ARS, Starkville, MS USA CMD Panel Screens - BNL 2007
Scheffler, Brian E. USDA-ARS, Starkville, MS USA CMD Panel Screens - CIR 2007
Fang, David D. Delta & Pine Land Company USA CMD Panel Screens - DPL 2007
Scheffler, Brian E. USDA-ARS, Starkville, MS USA CMD Panel Screens - JESPR 2007
Scheffler, Jodi A. USDA-ARS, Starkville, MS USA CMD Panel Screens - STV 2007
Frelichowski, James E. Jr. USDA-ARS, College Station, TX USA Germplasm Evaluation - GRIN COT 2007
Frelichowski, James E. Jr. USDA-ARS, College Station, TX USA Germplasm Collection - GRIN COT 2007
Love, Janna USDA-ARS, College Station, TX USA Pedigrees of GRIN COT 2007
Ulloa, Mauricio USDA-ARS, Shafter, CA USA CMD Panel Screens - MUSB 2007
Ulloa, Mauricio USDA-ARS, Shafter, CA USA CMD Panel Screens - MUSSMUCS 2007
Bowman, Daryl T. North Carolina State U. USA Pedigrees of Upland and Pima Cultivars 2007
Zhang, Tian-Zhen Nanjing Agri. U. China Map 7T-RIL 2007
Yu, Ji-Wen CRI-CAAS China Map CH-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map CS-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map D 2007
Paterson, Andrew H. PGML U. Georgia USA Map DS-F2 2007
Lacape, Jean Marc CIRAD France Map GV-BC1 2007
Lacape, Jean Marc CIRAD France Map GV-BC2 2007
Zhang, Xian-Long Huazhong Agri. U. China Map HP 2007
Paterson, Andrew H. PGML U. Georgia USA Map im-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map n2-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map PE-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map PK-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map SA-F2 2007
Paterson, Andrew H. PGML U. Georgia USA Map TW-F2 2007
Paterson, Andrew H. PGML U. Georgia USA RFLP-SSR marker data 2007
Pepper, Alan E. Texas A&M U. USA SSR primers and sequences - CM 2007
Fang, David D. DPL Company USA SSR primers and sequences - DPL 2007
Zhang, Xian-Long Huazhong Agri. U. China SSR primers and sequences - HAU 2006
Ulloa, Mauricio USDA-ARS, Shafter, CA USA SSR primers and sequences - MUCS 2006
Ulloa, Mauricio USDA-ARS, Shafter, CA USA SSR primers and sequences - MUSS 2006
Scheffler, Jodi A. USDA-ARS, Starkville, MS USA SSR primers and sequences - STV 2006
Lacape, Jean Marc CIRAD France Map T3-RIL 2006
Ulloa, Mauricio USDA-ARS, Shafter, CA USA SSR primers and sequences - MUSB  2005
Xu, Zhan-You USDA-ARS, Texas A&M U. USA TM-1 FPC contigs 2005
Du, Xiong-Ming CRI-CAAS China China Germplasm Sample Screens 2005
Lacape, Jean Marc CIRAD France SSR primers and sequences - CIR 2005
Saha, Sukumar USDA-ARS, Starkville, MS USA SSR primers and sequences - MGHES 2005
Zhang, Tian-Zhen Nanjing Agri. U. China SSR primers and sequences - NAU 2005
Yu, John Z. USDA-ARS, College Station, TX USA SSR primers and sequences - TMB 2005
Pepper, Alan E. Texas A&M U. USA SSR primers and sequences - JESPR 2002
Cantrell, Roy G. Cotton Inc. USA SSR primers and sequences - BNL 2000
Percival, Adward E. USDA-ARS, College Station, TX USA Cotton Obsolete Variety Collection 1997
Percival, Adward E. USDA-ARS, College Station, TX USA Asiatic Cotton Collection 1997
Percival, Adward E. USDA-ARS, College Station, TX USA Gossypium barbadense Collection 1997
Percival, Adward E. USDA-ARS, College Station, TX USA Cotton Wild Species Collection 1997
Percival, Adward E. USDA-ARS, College Station, TX USA Cotton Race Collection 1997