- Gossypium barbadense AD2 genome HAU-SGI assembly v1.0 (annot v1.0)
- Gossypium hirsutum AD1 genome CGP-BGI assembly v1.0 (annot v1.0)
- Gossypium hirsutum AD1 genome NAU-NBI assembly v1.1 (annot v1.1)
- Gossypium arboreum A2 genome CGP-BGI assembly v2.0 (annot v1.0)
- Gossypium raimondii D5 genome JGI assembly v2.0 (annot v2.1)
- Gossypium raimondii D5 genome CGP-BGI assembly v1.0