Skip to main content
Home

Search form

  • Species
    • arboreum
    • australe
    • barbadense
    • darwinii
    • herbaceum
    • hirsutum
    • kirkii
    • longicalyx
    • mustelinum
    • raimondii
    • thurberi
    • tomentosum
    • turneri
    • others
  • Data
    • Data Contributors
    • Data Overview
    • Data Download
    • Data Submission
    • Community Archives
    • Community Projects
    • Cotton Trait Ontology
    • Nomenclatures
    • Links to Variety Testing Data
    • Links to NCBI SRA Datasets
  • Search
    • Search Colleague
    • Search Genes and Transcripts
    • Search Genotype
    • Search Germplasm
    • Search Images
    • Search Map
    • Search Markers
    • Search Orthologs and Paralogs
    • Search Publications
    • Search QTLs
    • Search Sequences
    • Search Trait Descriptors
    • Search Trait Evaluation
    • MegaSearch
  • Tools
    • BIMS
    • BLAST+
    • CottonCyc
    • JBrowse
    • Map Viewer
    • Primer3
    • Sequence Retrieval
    • Synteny Viewer
  • ICGI
    • ICGI Home
    • ICGI FAQ
    • ICGI News
    • Become an ICGI Member
    • Forgotten Account Details?
    • Membership
    • ICGI Conferences
    • ICGI Elections
    • ICGI List Archives
  • General
    • About CottonGen
    • CottonGen Citations
    • Data Contributors
    • Conferences
    • Disclaimer
    • Employment
    • External Resources
    • Mailing Lists
    • Mailing List Archives
    • News Archive
    • Newsletters
    • Presentations
    • Steering Committee
    • Usage
    • Work Completed
    • Work in Progress
  • Help
    • Contact
    • User Manual
    • CottonGen FAQ
    • ICGI FAQ
  • Login
 If you use CottonGen please cite:  Yu, J. et al (2021) CottonGen: The Community Database for Cotton Genomics, Genetics, and Breeding Research.  Plants 2021, 10(12), 2805

CottonGen Home

Genomic, Genetic and Breeding Resources for Cotton Research Discovery and Crop Improvement

News and Events

  • Short video 'Overlaying Omics Data in PathwayCyc' available (11/22)
  • New SNP/Indel markers and genome locations available (11/22)
  • October 2022 CottonGen Newsletter available (10/22)
  • ZSTU G. stocksii (E1) genome assembly v1 available (10/22)
more

Major Species Quick Start

arboreum

barbadense

herbaceum

hirsutum

Tools Quick Start

genomics
  • View Genomes
  • Find Sequences
  • Search Genes
  • BLAST Sequences
genetics
  • Browse Maps
  • Search Markers
  • Find QTLs
  • Compare Maps
breeding
  • Search Trait Data 
  • Search Germplasm
  • Manage Breeding
  • Analyze Data
general
  • Submit Data
  • Presentations
  • Work Progress
  • Contact Us

Cotton Incorporated USDA ARS Bayer Corteva SAAESD WSU

CottonGen is developed by the Mainlab at Washington State University. 
Copyright © 2010-2022. This site is designed to work with IE, Chrome, Firefox, Safari and Opera. Contact us | follow us