About CottonGen

CottonGen is a cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton.  It is being built using the open-source Tripal database infrastructure.  CottonGen initially consolidated the data from CottonDB and the Cotton Marker Database, which includes sequences, genetic and physical maps, genotypic and phenotypic markers and polymorphisms, QTLs, pathogens, germplasm collections and trait evaluations, pedigrees,  and relevant bibliographic citations.  It has expanded to include annotated transcriptome, genome sequence, marker-trait-locus and breeding data, as well as enhanced tools for easy querying and visualizing research data. It will faciliate community communication and collaboration through housing the ICGI website and mailing lists. This project is funded by Cotton Incorporated, USDA NIFA NRSP10,  the USDA-ARS Crop Germplasm Research Unit at College Station, TX, the Southern Association of Agricultural Experiment Station Directors, Bayer CropScience, Dow/Phytogen, Monsanto and Washington State University.

The CottonGen Team

Dr. Dorrie Main

Principal Investigator

Dr. Sook Jung

Co-PI

Dr. Jing Yu

Research Associate

Dr. James Crabb

Data Curator

Dr. Ping Zheng

Research Associate

Dr. Jodi Humann

Research Associate

           

Chun-Huai Cheng

Developer

Taein Lee

Developer

Katheryn Buble

Developer

Heidi Hough

Database
Administrator

Morgan Frank

Data Curator

Kristin Scott

Data Curator