BNL1421, BNL1421 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Marker Overview


Name	BNL1421
Genbank ID	N/A
Type	SSR
Species	Gossypium hirsutum
Germplasm	Deltapine 90
Source Type	genomic
Repeat Motif	(AG)29, (AG)14
PCR Condition	Annealing temperature: 55
Primer 1	BNL1421_F: TGAAGATTTGGAGGCAATTG
Primer 2	BNL1421_R: GAAATCAAGCCTCAATTCGG
Polymorphism	P_ BNL1421
Comment	Primer data obtained in 2000

Germplasm


Stock Name	Type
Deltapine 90	obsolete_cultivar

Relationships

This genetic_marker is adjacent to the following primer feature(s):


Feature Name	Unique Name	Species	Type
BNL1421_F	BNL1421_F	Gossypium hirsutum	primer
BNL1421_R	BNL1421_R	Gossypium hirsutum	primer

The following marker_locus feature(s) are an instance of this genetic_marker:


Feature Name	Unique Name	Species	Type
BNL1421	BNL1421	Gossypium hirsutum	marker_locus
BNL1421-157	BNL1421-157	Gossypium hirsutum	marker_locus
BNL1421-192	BNL1421-192	Gossypium hirsutum	marker_locus
BNL1421-195	BNL1421-195	Gossypium hirsutum	marker_locus
NBNL1421	NBNL1421	Gossypium hirsutum	marker_locus
BNL1421	BNL1421-59.5	Gossypium hirsutum	marker_locus

Map Positions


#	Map Name	Linkage Group	Bin	Chromosome	Position	Locus	MapViewer
1	CCRI-36 x Hai-7124, F2 (2007)	CCRI-36 x Hai-7124, F2 (2007).CH-F2_A01	N/A	AD_chr.13	100.8	BNL1421	View
2	Guazuncho-2 x VH8-4602, consensus (2009)	Guazuncho-2 x VH8-4602, consensus (2009).GV-cons_c13	N/A	AD_chr.13	108.33	BNL1421	View
3	Monsanto SSR Bin Map, (2009)	Monsanto SSR Bin Map, (2009).BIN-SSR_chr13	N/A	AD_chr.13	110	BNL1421	View
4	TM-1 x 3-79, RIL (2006)	TM-1 x 3-79, RIL (2006).T3-RIL_chr.18b	N/A	AD_chr.18	29.5	BNL1421	View
5	Guazuncho-2 x VH8-4602, BC1 (2005)	Guazuncho-2 x VH8-4602, BC1 (2005).GV-BC1_chr13/lgA01	N/A	AD_chr.13	163.5	BNL1421	View
6	AD-genome wide Reference Map (2009)	AD-genome wide Reference Map (2009).Ref-chr13	N/A	AD_chr.13	119	BNL1421	View
7	PD6992 x SM3, F2:3 (2005)	PDSM-F2:3_chr13/LGA01	N/A	AD_chr.13	24.3	BNL1421	View
8	0-153 x sGK9708, RIL (2016)	0s-RIL_chr13	N/A	AD_chr.13	17.9	BNL1421	View
9	CCRI 12-4 x (AD)5-7, F2 (2015)	CAD5-F2_chr13	N/A	At.13	107.1	BNL1421	View
10	0-153 x sGK9708, RIL (2017)	0s-RIL.17_chr13	N/A	AD_chr.13	121.44	BNL1421	View
11	HS-46 x MARCABUCAG8US-1-88, RIL (2009)	HS-46 x MARCABUCAG8US-1-88, RIL (2009).HSM-RIL_chr13	N/A	AD_chr.13	0	BNL1421-157	View
12	HS-46 x MARCABUCAG8US-1-88, RIL (2009)	HS-46 x MARCABUCAG8US-1-88, RIL (2009).HSM-RIL_chr13	N/A	AD_chr.13	1	BNL1421-192	View
13	Vsg x (TM-1 x Hai-7124), DH (2005)	Vsg x (TM-1 x Hai-7124), DH (2005).VTH-DH.05_lgA01	N/A	AD_chr.13	49.6	BNL1421-195	View
14	TM-1 x Hai-7124, BC1 (2007)	TM-1 x Hai-7124, BC1 (2007).TH-BC1_chr13	N/A	AD_chr.13	70.6	BNL1421-195	View
15	TM-1 x Hai-7124, BC1 (2008)	TM-1 x Hai-7124, BC1 (2008).TH-BC1.08_chr13/A13	N/A	AD_chr.13	70.85	BNL1421-195	View
16	H18 x TM-1, F2 (2005)	H18TM1-F2_chr13	N/A	AD_chr.13	51.3	NBNL1421	View
17	PD 94042 x (AD)4-08, F2 (2016)	PA-F2_chr13	N/A	At.13	59.5	BNL1421	View