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Map Overview
Name | Guazuncho-2 x VH8-4602, BC1 (2005) |
Species | Gossypium hirsutum x barbadense
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Population type | BC1 |
Source url | http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp |
Genome group | AD |
Map type | genetic |
Map unit | cM |
Maternal parent | Guazuncho-2 |
Paternal parent | VH8-4602 |
Population size | 75 |
Number of loci | 1274 |
Number of QTL | 149 |
Number of linkage groups | 27 |
Publication | [view all] |
Contact | TropGene
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Stock
Name | Type | Details |
Guazuncho-2 x VH8-4602, BC1 | population | Alias: | GV-BC1 | Description: | genetic mapping | Population size: | 75 | Secondary id: | cdbpop_000018 | Pedigree: | Guazuncho-2 / VH8-4602 |
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Publication
Year | Publications |
2003 | Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26. |
2004 | Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75 |
Map Loci
This map contains 1,274 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CIR0009 | CIR009a | marker_locus | 0 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CIR0199 | CIR199a | marker_locus | 13.9 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | BNL2440 | BNL2440b | marker_locus | 25.4 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | BNL1693 | BNL1693b | marker_locus | 45.2 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | pAR0019 | pAR019a | marker_locus | 86.7 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CIR0055 | CIR055 | marker_locus | 102.1 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E3M4_84 | E3M4_84 | marker_locus | 113.3 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | BNL2921 | BNL2921 | marker_locus | 115.3 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E4M6_204 | E4M6_204 | marker_locus | 116.6 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E5M8_560 | E5M8_560 | marker_locus | 116.6 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E3M7_420 | E3M7_420 | marker_locus | 120.8 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CIR0018 | CIR018a | marker_locus | 122.5 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E3M4_420 | E3M4_420 | marker_locus | 125.1 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E2M7_500 | E2M7_500 | marker_locus | 136.3 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CG08 | CG08b | marker_locus | 148 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CG08 | CG08a | marker_locus | 148 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | BNL1350 | BNL1350a | marker_locus | 154.1 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | A1686 | A1686a | marker_locus | 155.5 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | pAR0099 | pAR099b | marker_locus | 158.3 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | A1593 | A1593 | marker_locus | 158.3 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CG09 | CG09c | marker_locus | 159.6 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | CIR0089 | CIR089 | marker_locus | 159.6 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | E5M7_340 | E5M7_340 | marker_locus | 164.8 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | pGH377 | pGH377 | marker_locus | 168.7 cM |
Guazuncho-2 x VH8-4602, BC1 (2005).chr01 | BNL3090 | BNL3090a | marker_locus | 168.7 cM |
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Map QTL
This map contains 149 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Guazuncho-2 x VH8-4602, BC1 (2005).chr10 | qCB.GV-BC1_ch10 | QTL | 84.7 cM | 95.7 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03 | qCB.GV-BC1_ch11 | QTL | 69.2 cM | 70.2 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr18 | qCB.GV-BC1_ch18 | QTL | 109.2 cM | 110.2 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr23 | qCB.GV-BC1_ch23 | QTL | 106.3 cM | 107.3 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03 | qCB.GV-BC1_ch24 | QTL | 39 cM | 47 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr25 | qCB.GV-BC1_ch25.1 | QTL | 55.7 cM | 72.7 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr25 | qCB.GV-BC1_ch25.2 | QTL | 62.2 cM | 63.2 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr25 | qCB.GV-BC1_ch25.3 | QTL | 62.3 cM | 75.3 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr26 | qCB.GV-BC1_ch26.1 | QTL | 86.2 cM | 87.2 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr26 | qCB.GV-BC1_ch26.2 | QTL | 66.6 cM | 67.6 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr03 | qCB.GV-BC1_ch03 | QTL | -0.5 cM | 0.5 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr06 | qCB.GV-BC1_ch06.1 | QTL | 10.6 cM | 11.6 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr06 | qCB.GV-BC1_ch06.2 | QTL | 117.8 cM | 128.8 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02 | qCB.GV-BC1_ch08 | QTL | 178.9 cM | 191.9 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr09 | qCB.GV-BC1_ch09.1 | QTL | 256.9 cM | 257.9 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr09 | qCB.GV-BC1_ch09.2 | QTL | 308.2 cM | 314.2 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01 | qCRD.GV-BC1_ch13 | QTL | 146.5 cM | 147.5 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr16 | qCRD.GV-BC1_ch16 | QTL | 118.9 cM | 119.9 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr17 | qCRD.GV-BC1_ch17 | QTL | 43.3 cM | 46.3 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr18 | qCRD.GV-BC1_ch18.1 | QTL | 142.8 cM | 143.8 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr18 | qCRD.GV-BC1_ch18.2 | QTL | 142.8 cM | 143.8 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08 | qCRD.GV-BC1_ch19.1 | QTL | 90.7 cM | 91.7 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08 | qCRD.GV-BC1_ch19.2 | QTL | 194.8 cM | 197.8 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr23 | qCRD.GV-BC1_ch23 | QTL | 94.8 cM | 110.8 cM | - |
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03 | qCRD.GV-BC1_ch24 | QTL | 41.3 cM | 58.3 cM | - |
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