BNL1672, BNL1672 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL1672
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL1672_orig=BNL3031_orig
Source Typegenomic
Repeat Motif(AG)14
PCR ConditionAnnealing temperature: 55
Primer 1BNL1672_F: TGGATTTGTCCCTCTGTGTG
Primer 2BNL1672_R: AACCAACTTTTCCAACACCG
PolymorphismP_ BNL1672
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1672_orig=BNL3031_origBNL1672_orig=BNL3031_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1(SM3 x SM12) x (X4133 x 8891), 4WC (2008)AD_ch23_Dt.09N/A25.5BNL1672View
27235 x TM-1, RIL (2007)AD_ch09_At.09N/A0BNL1672View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch09_At.09N/A50.56BNL1672View
4AD-genome wide Reference Map (2009)AD_ch23_Dt.09N/A99BNL1672View
5AD-genome wide Reference Map (2009)AD_ch09_At.09N/A130BNL1672View
6Zhongmiansuo-12 x 8891, RIL (2007)AD_ch23_Dt.09N/A0BNL1672View
7Guazuncho-2 x VH8-4602, consensus (2009)AD_ch23_Dt.09N/A57.46BNL1672View
87235 x TM-1, F2:3 (2005)AD_ch09_At.09N/A6.8BNL1672View
9CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch23_Dt.09N/A69.8BNL1672View
10CCRI-36 x Hai-7124, F2 (2007)AD_ch09_At.09N/A124.8BNL1672bView
11Emian-22 x 3-79, BC1 (2011)AD_ch09_At.09N/A71.84BNL1672bView
12Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch09_At.09N/A118BNL1672bView
13Handan-208 x Pima-90, F2:3 (2007)AD_ch23_Dt.09N/A65.5BNL1672bView
14TM-1 x 3-79, RIL (2012)AD_ch23_Dt.09N/A91.64BNL1672bView
15TM-1 x 3-79, RIL (2014)AD_ch23_Dt.09N/A52BNL1672bView
16Monsanto SSR Bin Map, (2009)AD_ch23_Dt.09N/A81BNL1672bView
17CCRI-36 x Hai-7124, F2 (2007)AD_ch23_Dt.09N/A115.8BNL1672aView
18Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch23_Dt.09N/A117.7BNL1672aView
19Handan-208 x Pima-90, F2:3 (2007)AD_ch09_At.09N/A51BNL1672aView
20TM-1 x 3-79, RIL (2012)AD_ch09_At.09N/A91.51BNL1672aView
21Emian-22 x 3-79, BC1 (2011)AD_ch23_Dt.09N/A65.69BNL1672aView
22TM-1 x 3-79, RIL (2014)AD_ch09_At.09N/A49.4BNL1672aView
23Monsanto SSR Bin Map, (2009)AD_ch09_At.09N/A81BNL1672aView
24HS-46 x MARCABUCAG8US-1-88, RIL (2009)AD_ch09_At.09N/A144BNL1672-136View
25TM-1 x Hai-7124, BC1 (2007)AD_ch09_At.09N/A59.7BNL1672-110View
26TM-1 x Hai-7124, BC1 (2008)AD_ch09_At.09N/A60.02BNL1672-110View
27Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch09_At.09N/A19.4BNL1672-110View
28TM-1 x Hai-7124, BC1 (2012)AD_ch09_At.09N/A60.3BNL1672-110View
29TM-1 x Hai-7124, BC1 (2007)AD_ch23_Dt.09N/A71.2BNL1672-140View
30TM-1 x Hai-7124, BC1 (2008)AD_ch23_Dt.09N/A70.92BNL1672-140View
31TM-1 x Hai-7124, BC1 (2012)AD_ch23_Dt.09N/A68.1BNL1672-140View
32Xinluzao-1 x Hai-7124, F2 (2008)AD_ch23_Dt.09N/A92.6BNL1672-1View
33Xinluzao-1 x Hai-7124, F2 (2008)AD_ch09_At.09N/A133.7BNL1672-2View
34TM-1 x Hai-7124, BC1S1 (2007)AD_ch23_Dt.09N/A62.9BNL1672_140View
35TM-1 x 3-79, RIL (2012.v3)AD_ch09_At.09N/A49.42BNL1672aView
36TM-1 x 3-79, RIL (2012.v3)AD_ch23_Dt.09N/A51.99BNL1672bView
37PD 94042 x (AD)4-08, F2 (2016)AD_ch09_At.09N/A71.1BNL1672bView
38PD 94042 x (AD)4-08, F2 (2016)AD_ch23_Dt.09N/A84.3BNL1672aView
Sequence
>BNL1672 ID=BNL1672; Name=BNL1672; organism=Gossypium hirsutum; type=genetic_marker; length=136bp
TGGATTTGTCCCTCTGTGTGTATAAAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTTATTAGTAAAATTGTAA
TGATCCAATTTTCTGTCGGTGTTGGAAAAGTTGGTT