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Marker Overview
Name | BNL1672 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL1672_orig=BNL3031_orig
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Source Type | genomic |
Repeat Motif | (AG)14 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL1672_F: TGGATTTGTCCCTCTGTGTG |
Primer 2 | BNL1672_R: AACCAACTTTTCCAACACCG |
Polymorphism | P_ BNL1672 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | (SM3 x SM12) x (X4133 x 8891), 4WC (2008) | AD_ch23_Dt.09 | N/A | 25.5 | BNL1672 | View |
2 | 7235 x TM-1, RIL (2007) | AD_ch09_At.09 | N/A | 0 | BNL1672 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch09_At.09 | N/A | 50.56 | BNL1672 | View |
4 | AD-genome wide Reference Map (2009) | AD_ch23_Dt.09 | N/A | 99 | BNL1672 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch09_At.09 | N/A | 130 | BNL1672 | View |
6 | Zhongmiansuo-12 x 8891, RIL (2007) | AD_ch23_Dt.09 | N/A | 0 | BNL1672 | View |
7 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch23_Dt.09 | N/A | 57.46 | BNL1672 | View |
8 | 7235 x TM-1, F2:3 (2005) | AD_ch09_At.09 | N/A | 6.8 | BNL1672 | View |
9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch23_Dt.09 | N/A | 69.8 | BNL1672 | View |
10 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch09_At.09 | N/A | 124.8 | BNL1672b | View |
11 | Emian-22 x 3-79, BC1 (2011) | AD_ch09_At.09 | N/A | 71.84 | BNL1672b | View |
12 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch09_At.09 | N/A | 118 | BNL1672b | View |
13 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch23_Dt.09 | N/A | 65.5 | BNL1672b | View |
14 | TM-1 x 3-79, RIL (2012) | AD_ch23_Dt.09 | N/A | 91.64 | BNL1672b | View |
15 | TM-1 x 3-79, RIL (2014) | AD_ch23_Dt.09 | N/A | 52 | BNL1672b | View |
16 | Monsanto SSR Bin Map, (2009) | AD_ch23_Dt.09 | N/A | 81 | BNL1672b | View |
17 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch23_Dt.09 | N/A | 115.8 | BNL1672a | View |
18 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch23_Dt.09 | N/A | 117.7 | BNL1672a | View |
19 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch09_At.09 | N/A | 51 | BNL1672a | View |
20 | TM-1 x 3-79, RIL (2012) | AD_ch09_At.09 | N/A | 91.51 | BNL1672a | View |
21 | Emian-22 x 3-79, BC1 (2011) | AD_ch23_Dt.09 | N/A | 65.69 | BNL1672a | View |
22 | TM-1 x 3-79, RIL (2014) | AD_ch09_At.09 | N/A | 49.4 | BNL1672a | View |
23 | Monsanto SSR Bin Map, (2009) | AD_ch09_At.09 | N/A | 81 | BNL1672a | View |
24 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch09_At.09 | N/A | 144 | BNL1672-136 | View |
25 | TM-1 x Hai-7124, BC1 (2007) | AD_ch09_At.09 | N/A | 59.7 | BNL1672-110 | View |
26 | TM-1 x Hai-7124, BC1 (2008) | AD_ch09_At.09 | N/A | 60.02 | BNL1672-110 | View |
27 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch09_At.09 | N/A | 19.4 | BNL1672-110 | View |
28 | TM-1 x Hai-7124, BC1 (2012) | AD_ch09_At.09 | N/A | 60.3 | BNL1672-110 | View |
29 | TM-1 x Hai-7124, BC1 (2007) | AD_ch23_Dt.09 | N/A | 71.2 | BNL1672-140 | View |
30 | TM-1 x Hai-7124, BC1 (2008) | AD_ch23_Dt.09 | N/A | 70.92 | BNL1672-140 | View |
31 | TM-1 x Hai-7124, BC1 (2012) | AD_ch23_Dt.09 | N/A | 68.1 | BNL1672-140 | View |
32 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch23_Dt.09 | N/A | 92.6 | BNL1672-1 | View |
33 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch09_At.09 | N/A | 133.7 | BNL1672-2 | View |
34 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch23_Dt.09 | N/A | 62.9 | BNL1672_140 | View |
35 | TM-1 x 3-79, RIL (2012.v3) | AD_ch09_At.09 | N/A | 49.42 | BNL1672a | View |
36 | TM-1 x 3-79, RIL (2012.v3) | AD_ch23_Dt.09 | N/A | 51.99 | BNL1672b | View |
37 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch09_At.09 | N/A | 71.1 | BNL1672b | View |
38 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch23_Dt.09 | N/A | 84.3 | BNL1672a | View |
Sequence
>BNL1672 ID=BNL1672; Name=BNL1672; organism=Gossypium hirsutum; type=genetic_marker; length=136bp TGGATTTGTCCCTCTGTGTGTATAAAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTTTATTAGTAAAATTGTAA TGATCCAATTTTCTGTCGGTGTTGGAAAAGTTGGTT
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