SC-1

Germplasm Overview


Name	SC-1
Alias	CV-72 [view all 5]
GRIN ID	PI 529598
Type	Cultivar
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	United States
Origin Detail	United States, Texas
Pedigree	CKR 421/PD4398
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 37]
SSR Genotype Data	[view all 101]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	CRS-19-410a

Alias


Synonym
CV-72
Pedigree-U510
PI 529598
SA 1544
SA-1544

Image


File Name	Legend	Dataset
SA-1544_CS13-0915_IMG_3085_BN.jpg	[SA-1544] boll showing nectaries, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3086_B.jpg	[SA-1544] green boll, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3087_B.jpg	[SA-1544] green boll, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_3088_BO.jpg	[SA-1544] boll open, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7603_F.jpg	[SA-1544] flower, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7604_LB.jpg	[SA-1544] leaf close up of the back surface, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_IMG_7605_FO.jpg	[SA-1544] flower open, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)
SA-1544_CS13-0915_MG_9160_L.jpg	[SA-1544] leaf, College Station Plot-0915, 2013	NCGC digital imaging (College Station, 2013)

Phenotypic Data

Total 37 trait scores

Download Table

#	Dataset	Descriptor	Value	Environment	Plot
1	NCGC germplasm evaluation, Before2006	lint color	white	Not Available
2	NCGC germplasm evaluation, CS13	boll color	green	US_TX_CS_2013	915
3	NCGC germplasm evaluation, CS13	boll gossypol glands	medium	US_TX_CS_2013	915
4	NCGC germplasm evaluation, CS13	boll nectaries	reduced	US_TX_CS_2013	915
5	NCGC germplasm evaluation, CS13	boll pitting	smooth	US_TX_CS_2013	915
6	NCGC germplasm evaluation, CS13	boll point	moderately pointed	US_TX_CS_2013	915
7	NCGC germplasm evaluation, CS13	boll shape	cone oval	US_TX_CS_2013	915
8	NCGC germplasm evaluation, CS13	boll size	medium	US_TX_CS_2013	915
9	NCGC germplasm evaluation, CS13	bract color	sun red	US_TX_CS_2013	915
10	NCGC germplasm evaluation, CS13	bract nectaries	present	US_TX_CS_2013	915
11	NCGC germplasm evaluation, CS13	bract teeth number	medium	US_TX_CS_2013	915
12	NCGC germplasm evaluation, CS13	bract teeth size	large	US_TX_CS_2013	915
13	NCGC germplasm evaluation, CS13	bract type	normal	US_TX_CS_2013	915
14	NCGC germplasm evaluation, CS13	canopy type	typical	US_TX_CS_2013	915
15	NCGC germplasm evaluation, CS13	fruiting type	normal	US_TX_CS_2013	915
16	NCGC germplasm evaluation, CS13	leaf color	green	US_TX_CS_2013	915
17	NCGC germplasm evaluation, CS13	leaf gossypol glands	medium	US_TX_CS_2013	915
18	NCGC germplasm evaluation, CS13	leaf shape	normal	US_TX_CS_2013	915
19	NCGC germplasm evaluation, CS13	leaf size	medium	US_TX_CS_2013	915
20	NCGC germplasm evaluation, CS13	lint color	white	US_TX_CS_2013	915
21	NCGC germplasm evaluation, CS13	petal color	cream	US_TX_CS_2013	915
22	NCGC germplasm evaluation, CS13	petal spot	none	US_TX_CS_2013	915
23	NCGC germplasm evaluation, CS13	photoperiod	open bolls	US_TX_CS_2013	915
24	NCGC germplasm evaluation, CS13	plant shape	normal	US_TX_CS_2013	915
25	NCGC germplasm evaluation, CS13	plot maturity	less than half open	US_TX_CS_2013	915

Page

Ssr Genotype Data

Total 101 records

Download Table

#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	Du_2005	BNL0169	genetic_marker	196	BNL0169_196
2	Du_2005	BNL0840	genetic_marker	157	BNL0840_157
3	Du_2005	BNL1034	genetic_marker	230\|250	BNL1034_230; BNL1034_250
4	Du_2005	BNL1047	genetic_marker	260\|280	BNL1047_260; BNL1047_280
5	Du_2005	BNL1317	genetic_marker	175\|191	BNL1317_175; BNL1317_191
6	Du_2005	BNL1350	genetic_marker	196	BNL1350_196
7	Du_2005	CIR0013	genetic_marker	205	CIR0013_205
8	Du_2005	CIR0019	genetic_marker	168\|172\|178	CIR0019_168; CIR0019_172; CIR0019_178
9	Du_2005	CIR0219	genetic_marker	140	CIR0219_140
10	Du_2005	CIR0228	genetic_marker	218	CIR0228_218
11	Du_2005	GH330	genetic_marker	100\|113	GH330_100; GH330_113
12	Du_2005	GH336	genetic_marker	98	GH336_98
13	Du_2005	GH434	genetic_marker	140\|170	GH434_140; GH434_170
14	Du_2005	GH441	genetic_marker	150	GH441_150
15	Du_2005	GH470	genetic_marker	110\|130	GH470_110; GH470_130
16	Du_2005	GH523	genetic_marker	125\|138\|160	GH523_125; GH523_138; GH523_160
17	Du_2005	GH527	genetic_marker	125\|175	GH527_125; GH527_175
18	Du_2005	NAU2265	genetic_marker	220\|240	NAU2265_220; NAU2265_240
19	Du_2005	BNL0786	genetic_marker	125	BNL0786_125
20	Du_2005	BNL0830	genetic_marker	128	BNL0830_128
21	Du_2005	BNL1079	genetic_marker	165	BNL1079_165
22	Du_2005	BNL1227	genetic_marker	250	BNL1227_250
23	Du_2005	BNL1231	genetic_marker	200	BNL1231_200
24	Du_2005	BNL3065	genetic_marker	189	BNL3065_189
25	Du_2005	BNL3084	genetic_marker	159	BNL3084_159

Page

Publications


Year	Publication
1979	Culp TW, Harrell DC. Registration of SC‐1 Cotton (Reg. No. 72). Crop Science. 1979; 19(3):410.

Snp Genotype Data

Total 63,056 records

Download Table


#	Dataset	Marker Name	Allele	Genotype
1	USDA_SNP63K_PD_genotype_2021	USDA_SNP0016	C/T	T
2	USDA_SNP63K_PD_genotype_2021	USDA_SNP0020	A/C	C
3	USDA_SNP63K_PD_genotype_2021	USDA_SNP0022	T/C	T
4	USDA_SNP63K_PD_genotype_2021	USDA_SNP0026	G/T	G
5	USDA_SNP63K_PD_genotype_2021	USDA_SNP0027	A/G	A
6	USDA_SNP63K_PD_genotype_2021	USDA_SNP0036	C/T	-
7	USDA_SNP63K_PD_genotype_2021	USDA_SNP0039	C/T	T
8	USDA_SNP63K_PD_genotype_2021	USDA_SNP0049	A/C	M
9	USDA_SNP63K_PD_genotype_2021	USDA_SNP0057	C/T	C
10	USDA_SNP63K_PD_genotype_2021	USDA_SNP0064	A/G	G
11	USDA_SNP63K_PD_genotype_2021	USDA_SNP0070	C/T	C
12	USDA_SNP63K_PD_genotype_2021	USDA_SNP0073	A/G	G
13	USDA_SNP63K_PD_genotype_2021	USDA_SNP0074	A/G	A
14	USDA_SNP63K_PD_genotype_2021	USDA_SNP0075	A/G	G
15	USDA_SNP63K_PD_genotype_2021	USDA_SNP0076	A/C	A
16	USDA_SNP63K_PD_genotype_2021	USDA_SNP0077	A/G	G
17	USDA_SNP63K_PD_genotype_2021	USDA_SNP0084	A/C	-
18	USDA_SNP63K_PD_genotype_2021	USDA_SNP0085	C/T	-
19	USDA_SNP63K_PD_genotype_2021	USDA_SNP0092	C/T	T
20	USDA_SNP63K_PD_genotype_2021	USDA_SNP0102	C/T	C
21	USDA_SNP63K_PD_genotype_2021	USDA_SNP0107	A/C	A
22	USDA_SNP63K_PD_genotype_2021	USDA_SNP0109	A/C	C
23	USDA_SNP63K_PD_genotype_2021	USDA_SNP0111	G/T	T
24	USDA_SNP63K_PD_genotype_2021	USDA_SNP0121	A/G	A
25	USDA_SNP63K_PD_genotype_2021	USDA_SNP0134	A/C	C

Page

...

Last

Cross References

External references for this accession


Database	Accession
GRIN_Regist	CV-72
COLL_Pedigree	Pedigree-U510
GRIN	PI 529598

In Collection

Name	ID used in Collection	External Database
Pedigrees of Upland and Pima Cultivars (v2005)	Pedigree-U510
NPGS Crop Science Registration (USA)	CV-72
GRIN NPGS Cotton Collection (USA)	PI 529598	GRIN:

Search form