|
Marker Overview
Name | CIR0013 |
Alias | CIR13 CIR013
|
Genbank ID | AJ566962 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Guazuncho-2 |
Source Sequence | AJ566962
|
Source Type | genomic |
Repeat Motif | (AC)7 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | CIR013_F: TCATTGCCATTTGACC |
Primer 2 | CIR013_R: TCCACCTTCCACACC |
Product Length | 208 |
Polymorphism | P_ CIR0013 |
Publication | [view all] |
Comment | Primer data obtained in 2005 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch21_Dt.11 | N/A | 55.26 | CIR013 | View |
2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch21_Dt.11 | N/A | 253.9 | CIR013 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 152.24 | CIR013 | View |
4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch21_Dt.11 | N/A | 143.28 | CIR013 | View |
5 | TM-1 x 3-79, RIL (2012) | AD_ch21_Dt.11 | N/A | 35.42 | CIR013 | View |
6 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch21_Dt.11 | N/A | 179.5 | CIR013 | View |
7 | DH962 x Jinmian-6, F2 (2009) | AD_chU | N/A | 99 | CIR013 | View |
8 | DH962 X Ji Mian 5, F2 (2015) | AD_ch21_Dt.11 | N/A | 38.32 | CIR013 | View |
9 | TM-1 x 3-79, RIL (2014) | AD_ch21_Dt.11 | N/A | 35.1 | CIR013 | View |
10 | DH962 x Ji Mian 5, RIL (2015) | AD_ch21_Dt.11 | N/A | 30.2 | CIR013 | View |
11 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch21_Dt.11 | N/A | 184.6 | CIR013b | View |
12 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch21_Dt.11 | N/A | 203.8 | CIR013a | View |
13 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 101 | cir0013 | View |
14 | GB713 x Nem-X, F2 (2011) | AD_ch21_Dt.11 | N/A | 62.4 | CIR013_212 | View |
15 | TM-1 x 3-79, RIL (2012.v3) | AD_ch21_Dt.11 | N/A | 35.11 | CIR013 | View |
Sequence
>CIR0013 ID=CIR0013; Name=CIR0013; organism=Gossypium hirsutum; type=genetic_marker; length=208bp TCATTGCCATTTGACCATAACACACACACACACTACAATCCAAATCCTAA AAACAAATTAGAAAGATGTTTTAAGTTTGGATAATCAAATAAACAAGTTT AGATTGTTTTAAAAGTAGATATTAATTGATAAAATAACCTGAAATAAACC ATCTTATGTTTTTAAATTTATTAAATTTCAGAAATGAATGCGGGGTGTGG AAGGTGGA
|