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Marker Overview
| Name | BNL3084 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3084_orig
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| Source Type | genomic |
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| Repeat Motif | (GA)12 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3084_F: TGTTCATAAAATGAAATCCAAGC |
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| Primer 2 | BNL3084_R: AGTGCGCGACGTAAGTAACC |
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| Polymorphism | P_ BNL3084 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch24_Dt.08 | N/A | 31.38 | BNL3084 | View |
| 2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch24_Dt.08 | N/A | 114.6 | BNL3084 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch24_Dt.08 | N/A | 79.41 | BNL3084 | View |
| 4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch24_Dt.08 | N/A | 64.19 | BNL3084 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch18_Dt.13 | N/A | 47 | BNL3084 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch08_At.08 | N/A | 82 | BNL3084 | View |
| 7 | TM-1 x 3-79, RIL (2012) | AD_ch24_Dt.08 | N/A | 19.8 | BNL3084 | View |
| 8 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch24_Dt.08 | N/A | 91.3 | BNL3084 | View |
| 9 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch24_Dt.08 | N/A | 114.9 | BNL3084 | View |
| 10 | AD-genome wide Reference Map (2009) | AD_ch24_Dt.08 | N/A | 113 | BNL3084 | View |
| 11 | TM-1 x 3-79, RIL (2006) | AD_ch08_At.08 | N/A | 65.7 | BNL3084 | View |
| 12 | TM-1 x 3-79, RIL (2014) | AD_ch24_Dt.08 | N/A | 23.7 | BNL3084 | View |
| 13 | Monsanto SSR Bin Map, (2009) | AD_ch24_Dt.08 | N/A | 81 | BNL3084 | View |
| 14 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch18_Dt.13 | N/A | 66.7 | BNL3084d | View |
| 15 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch23_Dt.09 | N/A | 166.8 | BNL3084b | View |
| 16 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch24_Dt.08 | N/A | 0 | BNL3084c | View |
| 17 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch24_Dt.08 | N/A | 71.9 | BNL3084a | View |
| 18 | TM-1 x Hai-7124, BC1 (2008) | AD_ch24_Dt.08 | N/A | 89.86 | BNL3084-165 | View |
| 19 | TM-1 x Hai-7124, BC1 (2007) | AD_ch24_Dt.08 | N/A | 21 | BNL3084-165 | View |
| 20 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch24_Dt.08 | N/A | 86.6 | BNL3084-165 | View |
| 21 | TM-1 x Hai-7124, BC1 (2012) | AD_ch24_Dt.08 | N/A | 78.3 | BNL3084-165 | View |
| 22 | TM-1 x 3-79, RIL (2012.v3) | AD_ch24_Dt.08 | N/A | 23.74 | BNL3084 | View |
Sequence
>BNL3084 ID=BNL3084; Name=BNL3084; organism=Gossypium hirsutum; type=genetic_marker; length=163bp
TGTTCATAAAATGAAATCCAAGCTATGAAAAAATGGAACTGTTATTGATT
CAGTNGAGAGAGAGAGAGAGAGAGAGAGAAAGGACATTTTGATTTTGACT
GCAATTTGAAAGAAGATGAAGAAAATTGCGGAAACGGGCAGATGGTTACT
TACGTCGCGCACT
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