TM-1 x 3-79, RIL (2014)

Map Overview

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NameTM-1 x 3-79, RIL (2014)
SpeciesGossypium hirsutum x barbadense
Map typegenetic
Population typeRIL
Map unitcM
Maternal parentTM-1
Paternal parent3-79
Population size186
Number of loci2486
Number of QTL75
Number of linkage groups26
Publication[view all]
ContactYu, John Z. (Zhi-Hong)
Stock
NameTypeDetails
TM-1 x 3-79, RILpopulation
Alias:T3-RIL
Description:genetic mapping
Population size:186
Alias:ctgpop_000059
Secondary id:cdbpop_000059
Pedigree:TM-1 / 3-79
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Map Loci
This map contains 2,486 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
TM-1 x 3-79, RIL (2014).chr01NAU2437NAU2437amarker_locus0 cM
TM-1 x 3-79, RIL (2014).chr01MUSS0161MUSS161cmarker_locus14.5 cM
TM-1 x 3-79, RIL (2014).chr01CIR0009CIR009bmarker_locus18.5 cM
TM-1 x 3-79, RIL (2014).chr01DPL0526DPL0526marker_locus24.7 cM
TM-1 x 3-79, RIL (2014).chr01CIR0199CIR199marker_locus32.5 cM
TM-1 x 3-79, RIL (2014).chr01SHIN-1397SHIN-1397bmarker_locus35.5 cM
TM-1 x 3-79, RIL (2014).chr01MUCS0164MUCS164cmarker_locus36.9 cM
TM-1 x 3-79, RIL (2014).chr01BNL1693BNL1693marker_locus43.2 cM
TM-1 x 3-79, RIL (2014).chr01NAU2474NAU2474marker_locus45.8 cM
TM-1 x 3-79, RIL (2014).chr01DC40052DC40052marker_locus53 cM
TM-1 x 3-79, RIL (2014).chr01DC20046DC20046marker_locus53.9 cM
TM-1 x 3-79, RIL (2014).chr01DPL0752DPL0752marker_locus56.1 cM
TM-1 x 3-79, RIL (2014).chr01DOW064DOW064marker_locus57.2 cM
TM-1 x 3-79, RIL (2014).chr01TMB1152tmb1152marker_locus60.7 cM
TM-1 x 3-79, RIL (2014).chr01MUSB0564MUSB0564bmarker_locus63.1 cM
TM-1 x 3-79, RIL (2014).chr01Gh641Gh641marker_locus66.2 cM
TM-1 x 3-79, RIL (2014).chr01MUSB0564MUSB0564amarker_locus69.5 cM
TM-1 x 3-79, RIL (2014).chr01TMB1439TMB1439marker_locus69.8 cM
TM-1 x 3-79, RIL (2014).chr01DPL0003DPL0003amarker_locus70.2 cM
TM-1 x 3-79, RIL (2014).chr01DPL0187DPL0187amarker_locus71 cM
TM-1 x 3-79, RIL (2014).chr01DPL0644DPL0644amarker_locus71.2 cM
TM-1 x 3-79, RIL (2014).chr01TMB0301TMB0301amarker_locus72.5 cM
TM-1 x 3-79, RIL (2014).chr01TMB1421TMB1421marker_locus73.3 cM
TM-1 x 3-79, RIL (2014).chr01BNL3886BNL3886bmarker_locus75.7 cM
TM-1 x 3-79, RIL (2014).chr01COT020COT020marker_locus76.9 cM
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Map QTL
This map contains 75 QTL:
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Linkage GroupNameTypeStartStopPeak
TM-1 x 3-79, RIL (2014).chr01qFM.T3-RIL_ch1.csQTL96.7 cM97.2 cM96.7 cM
TM-1 x 3-79, RIL (2014).chr01qFS.T3-RIL_ch1.shQTL109.6 cM109.9 cM109.8 cM
TM-1 x 3-79, RIL (2014).chr02qSTEMD.T3-RIL_ch2.csQTL21.9 cM26.2 cM21.8 cM
TM-1 x 3-79, RIL (2014).chr02qFLW.T3-RIL_ch2.csQTL48.2 cM49.4 cM48.2 cM
TM-1 x 3-79, RIL (2014).chr02qSL50.T3-RIL_ch2.csQTL48.2 cM49.4 cM48.2 cM
TM-1 x 3-79, RIL (2014).chr02qUQLW.T3-RIL_ch2.csQTL48.2 cM49.4 cM48.2 cM
TM-1 x 3-79, RIL (2014).chr03qLVFM.T3-RIL_ch3.bbQTL61.2 cM61.6 cM61.1 cM
TM-1 x 3-79, RIL (2014).chr05qFF.T3-RIL_ch5.shQTL98.4 cM99 cM98.3 cM
TM-1 x 3-79, RIL (2014).chr05qFNS.T3-RIL_ch5.shQTL104.3 cM107.2 cM104.3 cM
TM-1 x 3-79, RIL (2014).chr05qFLW.T3-RIL_ch5.csQTL133.8 cM135.1 cM134.7 cM
TM-1 x 3-79, RIL (2014).chr05qFS.T3-RIL_ch5.bbQTL133.8 cM135.1 cM134.7 cM
TM-1 x 3-79, RIL (2014).chr05qSL50.T3-RIL_ch5.csQTL133.8 cM135.1 cM134.7 cM
TM-1 x 3-79, RIL (2014).chr05qUQLW.T3-RIL_ch5.csQTL133.8 cM135.1 cM134.7 cM
TM-1 x 3-79, RIL (2014).chr05qFIM.T3-RIL_ch5.csQTL139.7 cM140.4 cM139.7 cM
TM-1 x 3-79, RIL (2014).chr06qFEL.T3-RIL_ch6.csQTL19.1 cM19.6 cM19.1 cM
TM-1 x 3-79, RIL (2014).chr06qFM.T3-RIL_ch6.csQTL28.6 cM33.1 cM28.6 cM
TM-1 x 3-79, RIL (2014).chr06qSFC.T3-RIL_ch6.csQTL28.6 cM33.1 cM28.6 cM
TM-1 x 3-79, RIL (2014).chr06qSI.T3-RIL_ch6.csQTL58.1 cM58.2 cM58.1 cM
TM-1 x 3-79, RIL (2014).chr07qFS.T3-RIL_ch7.1.shQTL52.5 cM52.7 cM52.4 cM
TM-1 x 3-79, RIL (2014).chr07qFS.T3-RIL_ch7.2.shQTL84 cM84.6 cM84 cM
TM-1 x 3-79, RIL (2014).chr08qLY.T3-RIL_ch8.shQTL88.8 cM89.2 cM-
TM-1 x 3-79, RIL (2014).chr09qFEL.T3-RIL_ch9.csQTL50.4 cM51.2 cM50.3 cM
TM-1 x 3-79, RIL (2014).chr10qFF.T3-RIL_ch10.shQTL58 cM59 cM58 cM
TM-1 x 3-79, RIL (2014).chr10qFM.T3-RIL_ch10.csQTL65 cM67.3 cM65 cM
TM-1 x 3-79, RIL (2014).chr10qFEL.T3-RIL_ch10.csQTL87 cM87.3 cM87 cM
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