BNL1693, BNL1693 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL1693
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL1693_orig
Source Typegenomic
Repeat Motif(CT)12+(CA)9
PCR ConditionAnnealing temperature: 55
Primer 1BNL1693_F: CCCTTGGGAATAGCAGGTG
Primer 2BNL1693_R: CATGTGTCTCCGTGTGTGTGTG
PolymorphismP_ BNL1693
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL1693_origBNL1693_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch01_At.01N/A45.2BNL1693bView
2TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch15_Dt.01N/A90BNL1693bView
3Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch15_Dt.01N/A22.9BNL1693aView
4TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch01_At.01N/A12.5BNL1693aView
5Guazuncho-2 x VH8-4602, consensus (2009)AD_ch01_At.01N/A14.17BNL1693View
6Guazuncho-2 x VH8-4602, consensus (2009)AD_ch15_Dt.01N/A21.6BNL1693View
7Guazuncho-2 x VH8-4602, RIL (2009)AD_ch01_At.01N/A21.91BNL1693View
8Guazuncho-2 x VH8-4602, RIL (2009)AD_ch15_Dt.01N/A12.3BNL1693View
9AD-genome wide Reference Map (2009)AD_ch01_At.01N/A124BNL1693View
10TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A101.15BNL1693View
11AD-genome wide Reference Map (2009)AD_ch15_Dt.01N/A31BNL1693View
12AD-genome wide Reference Map (2009)AD_ch21_Dt.11N/A247BNL1693View
13Yumian-1 x 7235, RIL (2015)AD_ch15_Dt.01N/A107.2BNL1693View
14TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A43.2BNL1693View
15SG 747 x Giza 75, BIL (2013)AD_ch15_Dt.01N/A129BNL1693View
16CCRI-35 x Yumian-1, RIL (2015)AD_ch01_At.01N/A75.7BNL1693View
17Monsanto SSR Bin Map, (2009)AD_ch01_At.01N/A41BNL1693View
18Handan-208 x Pima-90, F2:3 (2007)AD_ch01_At.01N/A17.8BNL1693b*View
19Handan-208 x Pima-90, F2:3 (2007)AD_ch15_Dt.01N/A139.9BNL1693*View
20Vsg x (TM-1 x Hai-7124), DH (2005)AD_ch21_Dt.11N/A244.9BNL1693-480View
21TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch26_Dt.12N/A0BNL1693cView
22CCRI-35 x Yumian-1, RIL (2017)AD_ch01_At.01N/A72BNL1693View
23TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A43.23BNL1693View
Sequence
>BNL1693 ID=BNL1693; Name=BNL1693; organism=Gossypium hirsutum; type=genetic_marker; length=231bp
CCCTTGGGAATAGCAGGTGATTATTGATTATGATGATGATTATTATTATT
TGTTTATATTACTGTACTAATTTTCAAAGGGTTCTTAAGAAAGAAAACAA
ACAAACAAACCAAATGAAACAAAAGATCATGCAAGAAAGCTGCTCAACTG
ACAGGCAGGTTACAGCTAGCAAAGTCCCTCTCTCTCTCTCTCTCTCTCTC
TCACACACACACACACACACGGAGACACATG