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Marker Overview
| Name | BNL0786 |
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| Alias | BNL786
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL0786_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)14 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL0786_F: CTTTCCACGTGTAATTTGTTGATA |
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| Primer 2 | BNL0786_R: GATCTTAACTCTTGCTCTCTCTCTCTC |
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| Polymorphism | P_ BNL0786 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | 3-79 x NM24016, RIL (2008) | AD_ch15_Dt.01 | N/A | 100.9 | BNL786 | View |
| 2 | 7235 x TM-1, RIL (2007) | AD_ch15_Dt.01 | N/A | 41.5 | BNL786 | View |
| 3 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch15_Dt.01 | N/A | 132.2 | BNL786 | View |
| 4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch15_Dt.01 | N/A | 3.3 | BNL786 | View |
| 5 | Yumian-1 x T586, F2:3 (2005) | AD_ch15_Dt.01 | N/A | 33.7 | BNL786 | View |
| 6 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch15_Dt.01 | N/A | 125.1 | BNL786 | View |
| 7 | 7235 x TM-1, F2:3 (2005) | AD_ch15_Dt.01 | N/A | 72.9 | BNL786 | View |
| 8 | W10 x TM-1, F2:3 (2015) | AD_ch15_Dt.01 | N/A | 11.1 | BNL786 | View |
| 9 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch15_Dt.01 | N/A | 111.4 | BNL786 | View |
| 10 | Pima S7 x Acala 44, F2.V76 (2005) | AD_ch06_At.06 | N/A | 30.6 | BNL786 | View |
| 11 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch15_Dt.01 | N/A | 89.5 | BNL0786 | View |
| 12 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch15_Dt.01 | N/A | 53.92 | BNL0786 | View |
| 13 | TM-1 x 3-79, RIL (2012) | AD_ch15_Dt.01 | N/A | 45.15 | BNL0786 | View |
| 14 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 149 | BNL0786 | View |
| 15 | TM-1 x 3-79, RIL (2006) | AD_ch15_Dt.01 | N/A | 27.8 | BNL0786 | View |
| 16 | Yumian-1 x T586, RIL (2006) | AD_ch15_Dt.01 | N/A | 13.5 | BNL0786 | View |
| 17 | Yumian-1 x T586, RIL (2015) | AD_ch15_Dt.01 | N/A | 40.7 | BNL0786 | View |
| 18 | TM-1 x 3-79, RIL (2014) | AD_ch15_Dt.01 | N/A | 74.7 | BNL0786 | View |
| 19 | SG 747 x Giza 75, BIL (2013) | AD_ch15_Dt.01 | N/A | 32.5 | BNL0786 | View |
| 20 | Monsanto SSR Bin Map, (2009) | AD_ch15_Dt.01 | N/A | 61 | BNL0786b | View |
| 21 | TM-1 x Hai-7124, BC1 (2007) | AD_ch15_Dt.01 | N/A | 43.4 | BNL786-120 | View |
| 22 | TM-1 x Hai-7124, BC1 (2008) | AD_ch15_Dt.01 | N/A | 41.82 | BNL786-120 | View |
| 23 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch15_Dt.01 | N/A | 26.8 | BNL786-120 | View |
| 24 | TM-1 x Hai-7124, BC1 (2012) | AD_ch15_Dt.01 | N/A | 82.6 | BNL786-120 | View |
| 25 | Yumian-1 x T586, RIL (2009) | AD_ch15_Dt.01 | N/A | 13.5 | BNL0786/110y(C15) | View |
| 26 | Yumian-1 x T586, F2:3 (2005.v0) | AD_ch15_Dt.01 | N/A | 33.7 | BNL786(C15) | View |
| 27 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch15_Dt.01 | N/A | 39.99 | BNL0786 | View |
| 28 | TM-1 x 3-79, RIL (2012.v3) | AD_ch15_Dt.01 | N/A | 74.74 | BNL0786 | View |
| 29 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch15_Dt.01 | N/A | 103.1 | BNL786 | View |
Sequence
>BNL0786 ID=BNL0786; Name=BNL0786; organism=Gossypium hirsutum; type=genetic_marker; length=121bp
CTTTCCACGTGTAATTTGTTGATAAAGCCACGTGGTATTCCCATTGGATA
CCTTTGGAAACCGGTCTAAAATAATGCAAAGAGAGAGAGAGAGAGAGAGA
GAGAGAGCAAGAGTTAAGATC
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