TN-RIL-80

Germplasm Overview


Name	TN-RIL-80
Alias	N/A
GRIN ID	N/A
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	recombinant inbred line (RIL) of TM-1 x NM24016
Origin Country	N/A
Origin Detail	New Mexico, USA
Pedigree	TM-1/NM24016 RIL
Maternal Parent	N/A
Paternal Parent	NM24016
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	[view all 252]
SNP Genotype Data	[view all 491]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	PRG-6-124

Alias


Synonym
NM80

Ssr Genotype Data

Total 252 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	TN-RIL (F5:9) SSR genotype	dpl1362	genetic_marker	287\|287	dpl1362_287; dpl1362_287
2	TN-RIL (F5:9) SSR genotype	musb0849	genetic_marker	210\|210	musb0849_210; musb0849_210
3	TN-RIL (F5:9) SSR genotype	dpl1651	genetic_marker	291\|291	dpl1651_291; dpl1651_291
4	TN-RIL (F5:9) SSR genotype	cot036	genetic_marker	198\|198	cot036_198; cot036_198
5	TN-RIL (F5:9) SSR genotype	bnl3431	genetic_marker	220\|220	bnl3431_220; bnl3431_220
6	TN-RIL (F5:9) SSR genotype	bnl2495	genetic_marker	195\|195	bnl2495_195; bnl2495_195
7	TN-RIL (F5:9) SSR genotype	bnl1151	genetic_marker	161\|161	bnl1151_161; bnl1151_161
8	TN-RIL (F5:9) SSR genotype	dpl1575	genetic_marker	119\|119	dpl1575_119; dpl1575_119
9	TN-RIL (F5:9) SSR genotype	bnl2805	genetic_marker	233\|233	bnl2805_233; bnl2805_233
10	TN-RIL (F5:9) SSR genotype	dc40058	genetic_marker	157\|157	dc40058_157; dc40058_157
11	TN-RIL (F5:9) SSR genotype	mucs0535	genetic_marker	274\|274	mucs0535_274; mucs0535_274
12	TN-RIL (F5:9) SSR genotype	bnl4069	genetic_marker	95\|95	bnl4069_95; bnl4069_95
13	TN-RIL (F5:9) SSR genotype	jespr0042	genetic_marker	141\|141	jespr0042_141; jespr0042_141
14	TN-RIL (F5:9) SSR genotype	jespr0006	genetic_marker	211\|211	jespr0006_211; jespr0006_211
15	TN-RIL (F5:9) SSR genotype	dpl0431	genetic_marker	204\|204	dpl0431_204; dpl0431_204
16	TN-RIL (F5:9) SSR genotype	dpl0075	genetic_marker	204\|204	dpl0075_204; dpl0075_204
17	TN-RIL (F5:9) SSR genotype	dpl0003	genetic_marker	187\|187	dpl0003_187; dpl0003_187
18	TN-RIL (F5:9) SSR genotype	dpl0137	genetic_marker	138\|138	dpl0137_138; dpl0137_138
19	TN-RIL (F5:9) SSR genotype	bnl2877	genetic_marker	119\|119	bnl2877_119; bnl2877_119
20	TN-RIL (F5:9) SSR genotype	nau1221	genetic_marker	220\|220	nau1221_220; nau1221_220
21	TN-RIL (F5:9) SSR genotype	shin-0334	genetic_marker	201\|201	shin-0334_201; shin-0334_201
22	TN-RIL (F5:9) SSR genotype	bnl3650	genetic_marker	354\|354	bnl3650_354; bnl3650_354
23	TN-RIL (F5:9) SSR genotype	bnl0827	genetic_marker	263\|263	bnl0827_263; bnl0827_263
24	TN-RIL (F5:9) SSR genotype	bnl3895	genetic_marker	188\|188	bnl3895_188; bnl3895_188
25	TN-RIL (F5:9) SSR genotype	mucs0127	genetic_marker	223\|223	mucs0127_223; mucs0127_223

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Publications


Year	Publication
2012	Gore MA; Percy RG; Zhang JF; Fang DD; Cantrell RG. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population. Journal of Plant Registrations. 2012; 6(1):124-127.

Snp Genotype Data

Total 491 records

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#	Dataset	Marker Name	Allele	Genotype
1	TN-RIL (F:9) SNP genotype	USDA_SNP0226	A/C	C\|C
2	TN-RIL (F:9) SNP genotype	USDA_SNP0227	C/T	-\|-
3	TN-RIL (F:9) SNP genotype	USDA_SNP0228	C/T	-\|-
4	TN-RIL (F:9) SNP genotype	USDA_SNP0229	C/G	-\|-
5	TN-RIL (F:9) SNP genotype	USDA_SNP0230	C/T	C\|C
6	TN-RIL (F:9) SNP genotype	USDA_SNP0231	A/G	-\|-
7	TN-RIL (F:9) SNP genotype	USDA_SNP0232	A/G	-\|-
8	TN-RIL (F:9) SNP genotype	USDA_SNP0233	C/G	G\|G
9	TN-RIL (F:9) SNP genotype	USDA_SNP0234	G/A	A\|A
10	TN-RIL (F:9) SNP genotype	USDA_SNP0235	G/T	G\|G
11	TN-RIL (F:9) SNP genotype	USDA_SNP0236	A/G	G\|G
12	TN-RIL (F:9) SNP genotype	USDA_SNP0237	A/G	-\|-
13	TN-RIL (F:9) SNP genotype	USDA_SNP0238	G/T	T\|T
14	TN-RIL (F:9) SNP genotype	USDA_SNP0239	C/T	-\|-
15	TN-RIL (F:9) SNP genotype	USDA_SNP0240	C/T	C\|C
16	TN-RIL (F:9) SNP genotype	USDA_SNP0241	A/G	G\|G
17	TN-RIL (F:9) SNP genotype	USDA_SNP0242	A/G	-\|-
18	TN-RIL (F:9) SNP genotype	USDA_SNP0243	C/T	-\|-
19	TN-RIL (F:9) SNP genotype	USDA_SNP0244	A/C	-\|-
20	TN-RIL (F:9) SNP genotype	USDA_SNP0245	A/T	A\|A
21	TN-RIL (F:9) SNP genotype	USDA_SNP0246	A/C	C\|C
22	TN-RIL (F:9) SNP genotype	USDA_SNP0247	A/G	A\|A
23	TN-RIL (F:9) SNP genotype	USDA_SNP0248	A/T	A\|A
24	TN-RIL (F:9) SNP genotype	USDA_SNP0249	C/T	-\|-
25	TN-RIL (F:9) SNP genotype	USDA_SNP0250	G/T	T\|T

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