USDA_SNP0232, USDA_SNP0232 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0232
dbSNP IDN/A
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018204.1chromosomeCM018204.1:22651256..22651318 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:89689226..89689288 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
At_chr12chromosomeAt_chr12:89232591..89232653 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A03chromosomeA03:21961177..21961239 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A03chromosomeGhir_A03:24226948..24227010 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A03chromosomeA03:23032203..23032265 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A03chromosomeA03:23791700..23791762 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A03chromosomeA03:22789719..22789781 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A03chromosomeGbar_A03:22569539..22569601 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A03chromosomeA03:22595247..22595309 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017612.1chromosomeCM017612.1:23003542..23003604 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017638.1chromosomeCM017638.1:23605395..23605457 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017690.1chromosomeCM017690.1:22780929..22780991 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A03chromosomeA03:24173604..24173666 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:95381062..95381124 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>USDA_SNP0232 ID=USDA_SNP0232; Name=USDA_SNP0232; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGAGCAGAACGGCAATGTCAATGGCATGTTC[A/G]CTGCCTATATA
ATGAAGGTACATAAGAA