USDA_SNP0229, USDA_SNP0229 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0229
dbSNP IDN/A
TypeSNP
SNP AllelesC/G
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018202.1chromosomeCM018202.1:8379389..8379451 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:9595229..9595291 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A01chromosomeA01:7989455..7989517 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A01chromosomeGhir_A01:8392377..8392439 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A01chromosomeA01:8053140..8053202 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:8548025..8548087 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:8361063..8361125 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A01chromosomeGbar_A01:8417044..8417106 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A01chromosomeA01:8074503..8074565 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017610.1chromosomeCM017610.1:9401662..9401724 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017636.1chromosomeCM017636.1:8569420..8569482 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017688.1chromosomeCM017688.1:8574488..8574550 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A01chromosomeA01:8558784..8558846 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:8533099..8533161 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:9405448..9405510 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Sequence
>USDA_SNP0229 ID=USDA_SNP0229; Name=USDA_SNP0229; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGAGAGAAAAGAGTGTGCTATCTCTAAAGTTACGACT[C/G]ACAAG
CCAATCCTGGATGAAAA