USDA_SNP0241, USDA_SNP0241 (genetic_marker) Gossypium hirsutum

Marker Overview
NameUSDA_SNP0241
dbSNP IDN/A
SNP Array ID
TAMU_CottonSNP63K:i00055Gh
TypeSNP
SNP AllelesA/G
SpeciesGossypium hirsutum
Publication[view all]
ContactStelly, David M.
Gore, Michael A.
Contact
NameDetails
Stelly, David M.
Description:Integrative structural genomics; Cytogenetics; Genetics; Cytogenomics; Radiation hybrid mapping; Chromosome manipulations. ; Wide-cross introgression.; QTL definition. ; Reproductive cytology, genetics and manipulations. ; Fiber cell initiation.
First name:David
Last name:Stelly
Title:Professor
Institution:Texas A&M University
Address:370 Olsen Blvd. , Dept. Soil & Crop Sci., TAMU, College Station, TX 77843-2474
Country:United States
Email:stelly@tamu.edu
Phone:+1 979 845 2745
Fax:+1 979 845 0456
Last update:19-Feb-2007
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Libraries
Library NameType
TAMU_CottonSNP63KSNP_chip
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr07chromosomeChr07:3714610..3714610 .
CM018225.1chromosomeCM018225.1:3901603..3901665 +
CM018212.1chromosomeCM018212.1:4336011..4336073 +
D5_11chromosomeD5_11:62006893..62006955 -
KI_11chromosomeKI_11:3476640..3476703 +
D10_11chromosomeD10_11:3894871..3894933 +
CM016624.1chromosomeCM016624.1:5243679..5243741 +
scaffold5296.1supercontigscaffold5296.1:10860..10922 -
Dt_chr7chromosomeDt_chr7:6159966..6160028 -
D11chromosomeD11:4191447..4191509 +
A11chromosomeA11:3930464..3930526 +
Ghir_D11chromosomeGhir_D11:4148644..4148706 +
Ghir_A11chromosomeGhir_A11:4447822..4447884 +
D11chromosomeD11:4022638..4022700 +
A11chromosomeA11:4271615..4271677 +
D11chromosomeD11:4131348..4131410 +
A11chromosomeA11:4329137..4329199 +
D11chromosomeD11:4046590..4046652 +
A11chromosomeA11:4480738..4480800 +
Gbar_D11chromosomeGbar_D11:3998317..3998379 +
Gbar_A11chromosomeGbar_A11:4105167..4105229 +
D11chromosomeD11:4006451..4006513 +
A11chromosomeA11:4377588..4377650 +
CM017633.1chromosomeCM017633.1:3981993..3982055 +
CM017620.1chromosomeCM017620.1:4469351..4469413 +
CM017659.1chromosomeCM017659.1:4051386..4051448 +
CM017646.1chromosomeCM017646.1:4516886..4516948 +
CM017711.1chromosomeCM017711.1:4051888..4051950 +
CM017698.1chromosomeCM017698.1:4385939..4386001 +
D11chromosomeD11:4146991..4147053 +
A11chromosomeA11:4542374..4542436 +
A09chromosomeA09:60469516..60469577 -
Chr11chromosomeChr11:4520530..4520592 +
Chr11chromosomeChr11:59490625..59490687 -
B_11chromosomeB_11:4365736..4365797 +
Chr07chromosomeChr07:3817926..3817988 +
chr07chromosomechr07:3577986..3578048 +
Chr_07chromosomeChr_07:3574441..3574503 +
Chr07chromosomeChr07:4029236..4029298 +
Chr07chromosomeChr07:3115044..3115106 +
Chr07chromosomeChr07:3041888..3041951 +
Chr07chromosomeChr07:3337178..3337240 +
E11chromosomeE11:4748191..4748253 +
F11chromosomeF11:3768445..3768507 +
Sequence
>USDA_SNP0241 ID=USDA_SNP0241; Name=USDA_SNP0241; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGAGTGTATAAAGCAATTAGAACAGGTTTTTTCTGTACTCTAGAGAG
AGAAGA[A/G]CACGGA