|
|
Marker Overview
| Name | BNL2805 |
|---|
| Genbank ID | N/A |
|---|
| Type | SSR |
|---|
| Species | Gossypium hirsutum |
|---|
| Germplasm | Deltapine 90 |
|---|
| Source Sequence | BNL2805_orig
|
|---|
| Source Type | genomic |
|---|
| Repeat Motif | (GA)10 |
|---|
| PCR Condition | Annealing temperature: 55 |
|---|
| Primer 1 | BNL2805_F: AGTTTGGAATTACAATAAATGTACTCG |
|---|
| Primer 2 | BNL2805_R: CCAAGGTCGGTCGGTTACTA |
|---|
| Polymorphism | P_ BNL2805 |
|---|
| Comment | Primer data obtained in 2000 |
|---|
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch11_At.11 | N/A | 119.8 | BNL2805 | View |
| 2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch11_At.11 | N/A | 86.49 | BNL2805 | View |
| 3 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch11_At.11 | N/A | 40.12 | BNL2805 | View |
| 4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch21_Dt.11 | N/A | 62.32 | BNL2805 | View |
| 5 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch11_At.11 | N/A | 233.4 | BNL2805 | View |
| 6 | Palmeri x K-101, F2 (2007) | AD_ch21_Dt.11 | N/A | 71.4 | BNL2805 | View |
| 7 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 72 | BNL2805 | View |
| 8 | Yumian-1 x T586, F2:7 (2008) | AD_ch11_At.11 | N/A | 1.5 | BNL2805 | View |
| 9 | Emian-22 x 3-79, BC1 (2011) | AD_ch11_At.11 | N/A | 98.33 | BNL2805 | View |
| 10 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch21_Dt.11 | N/A | 78.06 | BNL2805 | View |
| 11 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 48 | BNL2805 | View |
| 12 | TM-1 x 3-79, RIL (2012) | AD_ch11_At.11 | N/A | 99.39 | BNL2805 | View |
| 13 | Yumian-1 x T586, RIL (2006) | AD_ch11_At.11 | N/A | 56.6 | BNL2805 | View |
| 14 | Yumian-1 x T586, RIL (2015) | AD_ch11_At.11 | N/A | 76.4 | BNL2805 | View |
| 15 | TM-1 x 3-79, RIL (2014) | AD_ch11_At.11 | N/A | 102.6 | BNL2805 | View |
| 16 | Monsanto SSR Bin Map, (2009) | AD_ch11_At.11 | N/A | 101 | BNL2805 | View |
| 17 | Emian-22 x 3-79, BC1 (2012) | AD_ch11_At.11 | N/A | 99.9 | BNL2805 | View |
| 18 | Deltapine-61 x Texas-701, F2 (2007) | AD_ch11_At.11 | N/A | 0 | BNL2805-255 | View |
| 19 | Deltapine-61 x Texas-701, F2 (2007) | AD_ch21_Dt.11 | N/A | 16.4 | BNL2805-217 | View |
| 20 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch11_At.11 | N/A | 100.1 | BNL2805a | View |
| 21 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch21_Dt.11 | N/A | 113.6 | BNL2805b | View |
| 22 | Yumian-1 x T586, RIL (2009) | AD_ch11_At.11 | N/A | 56 | BNL2805/210y(C11,C21) | View |
| 23 | GB713 x Nem-X, F2 (2011) | AD_ch21_Dt.11 | N/A | 143.7 | BNL2805_217 | View |
| 24 | TM-1 x 3-79, RIL (2012.v3) | AD_ch11_At.11 | N/A | 102.59 | BNL2805 | View |
Sequence
>BNL2805 ID=BNL2805; Name=BNL2805; organism=Gossypium hirsutum; type=genetic_marker; length=234bp
AGTTTGGAATTACAATAAATGTACTCGGTCTGATAATTTACGAGAGAGAG
AGAGAGAGAGATGAGATTTAAAAGGACAAAAATAAAAAAAGTTGGTTATT
GGCGAANGTTACTGGTAAACTGGCAAGTGGAGGTTCTTACTTGTTTACTT
ATTACAGAACAGTAACAAGTCAACGGTTTGGCATGCAACGTTTACACCTT
AATTGTTAATTTTGTAGTAACCGACCGACCTTGG
|
