USDA_SNP0248, USDA_SNP0248 () Gossypium hirsutum

Marker Overview
NameUSDA_SNP0248
dbSNP IDN/A
TypeSNP
SNP AllelesA/T
SpeciesGossypium hirsutum
Publication[view all]
ContactGore, Michael A.
Contact
NameDetails
Gore, Michael A.
Description:Quantitative Genetics; Association Mapping; Genetic Diversity; Stress Tolerance
First name:Michael
Last name:Gore
Title:Research Scientist
Institution:USDA-ARS
Address:21881 North Cardon Lane, Maricopa, Arizona 85238
Country:United States
Email:Michael.Gore@ars.usda.gov
Phone:520 316-6358
Last update:15-Jul-2009
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018226.1chromosomeCM018226.1:56734029..56734091 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_12chromosomeD5_12:2971300..2971362 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D12chromosomeD12:56746368..56746430 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D12chromosomeGhir_D12:59412280..59412342 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D12chromosomeD12:58615586..58615648 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D12chromosomeD12:59461403..59461465 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D12chromosomeD12:57540973..57541035 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D12chromosomeGbar_D12:55934920..55934982 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D12chromosomeD12:57711252..57711314 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017634.1chromosomeCM017634.1:57567072..57567134 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017660.1chromosomeCM017660.1:60536503..60536565 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017712.1chromosomeCM017712.1:58142806..58142868 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D12chromosomeD12:59958042..59958104 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr12chromosomeChr12:54764389..54764451 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr08chromosomeChr08:56708782..56708844 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>USDA_SNP0248 ID=USDA_SNP0248; Name=USDA_SNP0248; organism=Gossypium hirsutum; type=genetic_marker; length=67bp
TGCAGATATCAGTCTCTCATCACATAATTGGACT[A/T]CCATGTTTTAC
CTAACCCAAAATAAATA