TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c02	JESPR0101	JESPR101a	marker_locus	60.15 cM
TM-1 x 3-79, RIL (2012).c02	BNL3590	BNL3590a	marker_locus	60.68 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0915	MUSB0915	marker_locus	61.54 cM
TM-1 x 3-79, RIL (2012).c02	MUSS0294	MUSS294	marker_locus	62.89 cM
TM-1 x 3-79, RIL (2012).c02	DPL0046	DPL0046	marker_locus	63.2 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0904	musb0904	marker_locus	65.74 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10247_108	UCcg10247_108	marker_locus	66.41 cM
TM-1 x 3-79, RIL (2012).c02	JESPR0227	JESPR227a	marker_locus	67.27 cM
TM-1 x 3-79, RIL (2012).c02	DPL0674	DPL0674	marker_locus	68.25 cM
TM-1 x 3-79, RIL (2012).c02	Gh669	Gh669	marker_locus	70.79 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cot10111_542	UCcot10111_542	marker_locus	72.89 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10614_274	UCcg10614_274	marker_locus	73.65 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10614_520	UCcg10614_520	marker_locus	73.65 cM
TM-1 x 3-79, RIL (2012).c02	TMB1578	TMB1578	marker_locus	73.93 cM
TM-1 x 3-79, RIL (2012).c02	JESPR0179	JESPR179	marker_locus	76.19 cM
TM-1 x 3-79, RIL (2012).c02	MUSS0233	MUSS233	marker_locus	77.47 cM
TM-1 x 3-79, RIL (2012).c02	MUCS0230	MUCS230	marker_locus	77.51 cM
TM-1 x 3-79, RIL (2012).c02	MUSB1017	MUSB1017	marker_locus	78.88 cM
TM-1 x 3-79, RIL (2012).c02	BNL3512	BNL3512	marker_locus	84.15 cM
TM-1 x 3-79, RIL (2012).c02	BNL1897	BNL1897	marker_locus	86.46 cM
TM-1 x 3-79, RIL (2012).c02	TMB2386	tmb2386	marker_locus	89.84 cM
TM-1 x 3-79, RIL (2012).c02	BNL1434	BNL1434	marker_locus	95.17 cM
TM-1 x 3-79, RIL (2012).c02	BNL3972	BNL3972	marker_locus	105.53 cM
TM-1 x 3-79, RIL (2012).c02	JESPR0156	JESPR156b	marker_locus	112.25 cM
TM-1 x 3-79, RIL (2012).c02	BNL3545	BNL3545c	marker_locus	117.49 cM

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TM-1 x 3-79, RIL (2012)