TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c05	TMB1418	TMB1418b	marker_locus	12.23 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cot10109_492	UCcot10109_492	marker_locus	14.97 cM
TM-1 x 3-79, RIL (2012).c05	MUSS0106	MUSS106c	marker_locus	16.28 cM
TM-1 x 3-79, RIL (2012).c05	TMB1296	tmb1296	marker_locus	17.02 cM
TM-1 x 3-79, RIL (2012).c05	MUSS0460	MUSS460	marker_locus	17.45 cM
TM-1 x 3-79, RIL (2012).c05	MUCS0337	MUCS337	marker_locus	17.88 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg10816_726	UCcg10816_726	marker_locus	19.25 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg10816_112	UCcg10816_112	marker_locus	19.25 cM
TM-1 x 3-79, RIL (2012).c05	CIR0165	CIR165a	marker_locus	22.32 cM
TM-1 x 3-79, RIL (2012).c05	CIR0005	CIR005	marker_locus	22.36 cM
TM-1 x 3-79, RIL (2012).c05	BNL3452	BNL3452a	marker_locus	22.74 cM
TM-1 x 3-79, RIL (2012).c05	MUSS0173	MUSS173	marker_locus	27.84 cM
TM-1 x 3-79, RIL (2012).c05	MUCS0045	MUCS045	marker_locus	27.92 cM
TM-1 x 3-79, RIL (2012).c05	CIR0126	CIR126	marker_locus	28.47 cM
TM-1 x 3-79, RIL (2012).c05	BNL1044	BNL1044a	marker_locus	33.61 cM
TM-1 x 3-79, RIL (2012).c05	DPL0594	DPL0594b	marker_locus	34.75 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg11199_82	UCcg11199_82	marker_locus	34.97 cM
TM-1 x 3-79, RIL (2012).c05	DPL0838	dpl0838	marker_locus	40.12 cM
TM-1 x 3-79, RIL (2012).c05	DOW014	DOW014	marker_locus	42.04 cM
TM-1 x 3-79, RIL (2012).c05	BNL4071	BNL4071b	marker_locus	43.34 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg10440_267	UCcg10440_267	marker_locus	43.82 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg11211_484	UCcg11211_484	marker_locus	44.68 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg10490_49	UCcg10490_49	marker_locus	45.4 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg10490_331	UCcg10490_331	marker_locus	45.53 cM
TM-1 x 3-79, RIL (2012).c05	UCD_cg11000_346	UCcg11000_346	marker_locus	47.44 cM

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TM-1 x 3-79, RIL (2012)