TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c03	UCD195	UCD195b	marker_locus	85.08 cM
TM-1 x 3-79, RIL (2012).c03	TMB1748	TMB1748	marker_locus	85.15 cM
TM-1 x 3-79, RIL (2012).c03	UCD277	UCD277b	marker_locus	85.2 cM
TM-1 x 3-79, RIL (2012).c03	JESPR0191	JESPR191	marker_locus	85.67 cM
TM-1 x 3-79, RIL (2012).c03	MUCS0439	MUCS439	marker_locus	87.48 cM
TM-1 x 3-79, RIL (2012).c03	Gh527	Gh527	marker_locus	89.01 cM
TM-1 x 3-79, RIL (2012).c03	DOW035	DOW035	marker_locus	89.21 cM
TM-1 x 3-79, RIL (2012).c03	MUSB1101	MUSB1101a	marker_locus	89.52 cM
TM-1 x 3-79, RIL (2012).c03	BNL3408	BNL3408a	marker_locus	94.68 cM
TM-1 x 3-79, RIL (2012).c03	CIR0347	CIR347b	marker_locus	95.5 cM
TM-1 x 3-79, RIL (2012).c03	NAU1167	NAU1167	marker_locus	97.46 cM
TM-1 x 3-79, RIL (2012).c03	UCD_cot10105_151	UCcot10105_151	marker_locus	110.04 cM
TM-1 x 3-79, RIL (2012).c03	MUCS0547	MUCS547	marker_locus	116.37 cM
TM-1 x 3-79, RIL (2012).c04	MUSB0264	MUSB0264b	marker_locus	0 cM
TM-1 x 3-79, RIL (2012).c04	BNL3089	BNL3089	marker_locus	13.66 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11185_886	UCcg11185_886	marker_locus	16.91 cM
TM-1 x 3-79, RIL (2012).c04	DPL0573	DPL0573	marker_locus	23.88 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11256_354	UCcg11256_354	marker_locus	28.88 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11256_182	UCcg11256_182	marker_locus	28.88 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cot10520_501	UCcot10520_501	marker_locus	30.43 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg10883_389	UCcg10883_389	marker_locus	32.92 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg10883_495	UCcg10883_495	marker_locus	32.92 cM
TM-1 x 3-79, RIL (2012).c04	DOW071	DOW071	marker_locus	35.04 cM
TM-1 x 3-79, RIL (2012).c04	MUSS0396	MUSS396a	marker_locus	38.29 cM
TM-1 x 3-79, RIL (2012).c04	Gh107	Gh107	marker_locus	39.67 cM

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TM-1 x 3-79, RIL (2012)