TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c02	NAU2253	NAU2253	marker_locus	13.21 cM
TM-1 x 3-79, RIL (2012).c02	BNL0663	bnl0663	marker_locus	16.6 cM
TM-1 x 3-79, RIL (2012).c02	JESPR0304	JESPR304	marker_locus	21.25 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10798_224	UCcg10798_224	marker_locus	34.71 cM
TM-1 x 3-79, RIL (2012).c02	DOW066	DOW066	marker_locus	43.21 cM
TM-1 x 3-79, RIL (2012).c02	TMB1194	TMB1194	marker_locus	48.75 cM
TM-1 x 3-79, RIL (2012).c02	TMB2905	TMB2905	marker_locus	49.21 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0749	MUSB0749	marker_locus	49.82 cM
TM-1 x 3-79, RIL (2012).c02	MUSS0114	MUSS114b	marker_locus	51.08 cM
TM-1 x 3-79, RIL (2012).c02	MUSS0073	MUSS073b	marker_locus	51.92 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10798_80	UCcg10798_80	marker_locus	52.58 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0958	MUSB0958e	marker_locus	53.27 cM
TM-1 x 3-79, RIL (2012).c02	MUSB1178	MUSB1178	marker_locus	53.92 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0888	MUSB0888a	marker_locus	54.66 cM
TM-1 x 3-79, RIL (2012).c02	TMB1025	TMB1025b	marker_locus	55.41 cM
TM-1 x 3-79, RIL (2012).c02	Gh198	Gh198	marker_locus	55.99 cM
TM-1 x 3-79, RIL (2012).c02	MUSB0194	musb0194	marker_locus	56.57 cM
TM-1 x 3-79, RIL (2012).c02	TMB0514	TMB0514	marker_locus	56.78 cM
TM-1 x 3-79, RIL (2012).c02	UCD_cg10587_240	UCcg10587_240	marker_locus	56.94 cM
TM-1 x 3-79, RIL (2012).c02	MUCS0106	MUCS106a	marker_locus	56.99 cM
TM-1 x 3-79, RIL (2012).c02	DPL0216	DPL0216	marker_locus	57.03 cM
TM-1 x 3-79, RIL (2012).c02	TMB0471	TMB0471a	marker_locus	57.79 cM
TM-1 x 3-79, RIL (2012).c02	MUSS0599	MUSS599	marker_locus	59.18 cM
TM-1 x 3-79, RIL (2012).c02	BNL3971	BNL3971	marker_locus	59.5 cM
TM-1 x 3-79, RIL (2012).c02	MUCS0620	MUCS620	marker_locus	59.7 cM

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TM-1 x 3-79, RIL (2012)