MUCS0620, MUCS0620 (genetic_marker) Gossypium arboreum

Marker Overview
NameMUCS0620
AliasMUCS620
Genbank IDN/A
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8401
Source TypeEST
Repeat MotifTTA(2)TA(6)
PCR ConditionAnnealing temperature: 55
Primer 1MUCS620_F: CGAAGATGGGAAGAGAAAGG
Primer 2MUCS620_R: CAAAAGCTAGCAACATTACAACTCC
Product Length248
ContactUlloa, Mauricio
CommentPrimer data obtained in 2007-11
Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Germplasm
Stock NameType
AKA 8401accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch02_At.02N/A97mucs0620View
2LMY22 x LY343, RIL (2016)chr.2N/A35.5mucs0620View
3TM-1 x 3-79, RIL (2006)AD_ch02_At.02N/A47.6MUCS620View
4TM-1 x 3-79, RIL (2012)AD_ch02_At.02N/A59.7MUCS620View
5TM-1 x 3-79, RIL (2014)AD_ch02_At.02N/A60.4MUCS620View
6TM-1 x 3-79, RIL (2012.v3)AD_ch02_At.02N/A60.38MUCS620View
Sequence
>MUCS0620 ID=MUCS0620; Name=MUCS0620; organism=Gossypium arboreum; type=genetic_marker; length=248bp
CGAAGATGGGAAGAGAAAGGAGTGAAGAGAGATTTTAAAAAAAGGGAATG
CTCATCCTCTTTCTCTTTTACTTCATTTGTTATTATATATATATATATGT
AAGAGACAAGATTGAGAAGTTAGCTAAATGACTTTTCATACAGATTGCAA
GGAGTCTTGTTTTTTTTTATATGTACTTCAGAGCAGCTGATTTCCTTCTT
TTTTTTTTTTTTTAATCCTTTTTGGAGTTGTAATGTTGCTAGCTTTTG