MUSS0599, MUSS0599 (genetic_marker) Gossypium arboreum

Marker Overview
NameMUSS0599
AliasMUSS599
Genbank IDN/A
TypeSSR
SpeciesGossypium arboreum
GermplasmAKA 8401
Source TypeEST
Repeat MotifTA(7)
PCR ConditionAnnealing temperature: 55
Primer 1MUSS599_F: AAATAACAGCCGAAGATGGG
Primer 2MUSS599_R: CAAAAGCTAGCAACATTACAACTCC
Product Length258
ContactUlloa, Mauricio
CommentPrimer data obtained in 2007-11
Contact
NameDetails
Ulloa, Mauricio
Description:Breeding, genetics, and Genomics
First name:Mauricio
Last name:Ulloa
Title:Research Geneticist
Institution:USDA-ARS, W.I.C.S., Res. Unit
Address:17053 N. Shafter Ave., Shafter, California 93263
Country:United States
Email:mauricio.ulloa@usda.gov
Phone:661-746-8009
Fax:746-746-1619
Keywords:Breeding and Genomics
Last update:27-Apr-2010
Germplasm
Stock NameType
AKA 8401accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch02_At.02N/A95muss0599View
2LMY22 x LY343, RIL (2016)chr.2N/A39.5muss0599View
3TM-1 x 3-79, RIL (2006)AD_ch02_At.02N/A48.8MUSS599View
4TM-1 x 3-79, RIL (2012)AD_ch02_At.02N/A59.18MUSS599View
5TM-1 x 3-79, RIL (2014)AD_ch02_At.02N/A60MUSS599View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch02_At.02N/A95.8MUSS599View
7TM-1 x 3-79, RIL (2012.v3)AD_ch02_At.02N/A59.97MUSS599View
8PD 94042 x (AD)4-08, F2 (2016)AD_ch02_At.02N/A6.5MUSS599View
Sequence
>MUSS0599 ID=MUSS0599; Name=MUSS0599; organism=Gossypium arboreum; type=genetic_marker; length=258bp
AAATAACAGCCGAAGATGGGAAGAGAAAGGAGTGAAGAGAGATTTTAAAA
AAAGGGAATGCTCATCCTCTTTCTCTTTTACTTCATTTGTTATTATATAT
ATATATATGTAAGAGACAAGATTGAGAAGTTAGCTAAATGACTTTTCATA
CAGATTGCAAGGAGTCTTGTTTTTTTTTATATGTACTTCAGAGCAGCTGA
TTTCCTTCTTTTTTTTTTTTTTTAATCCTTTTTGGAGTTGTAATGTTGCT
AGCTTTTG