TM-1 x 3-79, RIL (2012)

Map Overview


Name	TM-1 x 3-79, RIL (2012)
Species	Gossypium hirsutum x barbadense
Population type	RIL
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	TM-1
Paternal parent	3-79
Population size	186
Number of loci	2084
Number of linkage groups	26
Publication	[view all]
Contact	Yu, John Z. (Zhi-Hong)

Stock

Name

Type

Details

TM-1 x 3-79, RIL

population

Alias:	T3-RIL
Description:	genetic mapping
Population size:	186
Alias:	ctgpop_000059
Secondary id:	cdbpop_000059
Pedigree:	TM-1 / 3-79

Contact

Name

Details

Yu, John Z. (Zhi-Hong)

Description:	Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:	John
Last name:	Yu
Title:	Research Geneticist
Institution:	USDA-ARS
Address:	2765 F&B Road, College Station, Texas 77845
Country:	United States
Email:	zyu@qutun.tamu.edu
Phone:	1-979-260-9237
Fax:	1-979-260-9333
Keywords:	Cotton Molecular Genetics
Last update:	6-Sep-2007

Publication


Year	Publications
2012	Yu JZ, Kohel RJ, Fang DD, Cho J, Van Deynze A, Ulloa M, Hoffman SM, Pepper AE, Stelly DM, Jenkins JN, Saha S, Kumpatla SP, Shah MR, Hugie WV, Percy RG. A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome. G3 (Bethesda, Md.). 2012 Jan; 2(1):43-58.

Map Loci

This map contains 2,084 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
TM-1 x 3-79, RIL (2012).c04	Gh124	Gh124	marker_locus	41.4 cM
TM-1 x 3-79, RIL (2012).c04	DOW038	DOW038	marker_locus	42.3 cM
TM-1 x 3-79, RIL (2012).c04	DPL0299	DPL0299	marker_locus	43.62 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg10896_208	UCcg10896_208	marker_locus	45.1 cM
TM-1 x 3-79, RIL (2012).c04	BNL1167	BNL1167	marker_locus	45.68 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cot10251_72	UCcot10251_72	marker_locus	46.34 cM
TM-1 x 3-79, RIL (2012).c04	TMB0809	tmb0809	marker_locus	46.42 cM
TM-1 x 3-79, RIL (2012).c04	DPL0273	DPL0273	marker_locus	47.11 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg10488_64	UCcg10488_64	marker_locus	47.35 cM
TM-1 x 3-79, RIL (2012).c04	BNL1044	BNL1044c	marker_locus	48.1 cM
TM-1 x 3-79, RIL (2012).c04	MUSS0027	MUSS027b	marker_locus	49.92 cM
TM-1 x 3-79, RIL (2012).c04	DOW069	DOW069	marker_locus	50.51 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11310_419	UCcg11310_419	marker_locus	52.1 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11310_334	UCcg11310_334	marker_locus	52.29 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cot10213_226	UCcot10213_226	marker_locus	52.3 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cot10213_61	UCcot10213_61	marker_locus	52.3 cM
TM-1 x 3-79, RIL (2012).c04	MUSB1050	MUSB1050a	marker_locus	53.19 cM
TM-1 x 3-79, RIL (2012).c04	TMB0446	TMB0446a	marker_locus	54.23 cM
TM-1 x 3-79, RIL (2012).c04	CIR0048	CIR048a	marker_locus	54.63 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cgs10021_229	UCcgs10021_229	marker_locus	56.3 cM
TM-1 x 3-79, RIL (2012).c04	MUSS0284	MUSS284	marker_locus	56.81 cM
TM-1 x 3-79, RIL (2012).c04	UCD_cg11425_194	UCcg11425_194	marker_locus	58.09 cM
TM-1 x 3-79, RIL (2012).c04	DPL0667	DPL0667	marker_locus	58.43 cM
TM-1 x 3-79, RIL (2012).c04	DPL0085	DPL0085	marker_locus	59.92 cM
TM-1 x 3-79, RIL (2012).c04	BNL0530	BNL0530b	marker_locus	61.46 cM

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TM-1 x 3-79, RIL (2012)