MUSB1017, MUSB1017 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB1017
Genbank IDDX538295
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX538295.2
Source TypeEST
Repeat Motif(TGGA)3
PCR ConditionAnnealing temperature: 50
Primer 1MUSB1017_F: CTCTCTTGGACTCAAACCTGAGC
Primer 2MUSB1017_R: ACATTCCAACTCTGGGTCTGC
Product Length327
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB1017
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX538295
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX538295.2DX538295.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch02_At.02N/A33.83MUSB1017View
2Guazuncho-2 x VH8-4602, RIL (2009)AD_ch02_At.02N/A26.6MUSB1017View
3TM-1 x 3-79, RIL (2006)AD_ch02_At.02N/A31.4MUSB1017View
4TM-1 x 3-79, RIL (2012)AD_ch02_At.02N/A78.88MUSB1017View
5AD-genome wide Reference Map (2009)AD_ch02_At.02N/A142MUSB1017View
6TM-1 x 3-79, RIL (2014)AD_ch02_At.02N/A76.6MUSB1017View
7TM-1 x 3-79, RIL (2012.v3)AD_ch02_At.02N/A76.63MUSB1017View
Sequence
>MUSB1017 ID=MUSB1017; Name=MUSB1017; organism=Gossypium hirsutum; type=genetic_marker; length=327bp
CTCTCTTGGACTCAAACCTGAGCGGATATCAGAGGCAATAACTTGGATCA
AAAGGGTTGGAAACACTGCTGGCTTGGGATTATAATGGTAGCTTGGTGGA
TGGATGGACTGATTTGGTTACCACAAAGGCCTATCAAGCCTGCTGAAGCT
TCCCCCCCCCCCTCCTTTTTCCCCAAGCTGCATTTTTTTAGGCTAAAGAT
CGGACCCAATATTACTTGTAGTGCAAAGGCCACCATTATAGCAATCTGTA
AATTAATGAGAAAGAATTTTAAAGTTCTTTTAAAGGCATTTTCGTGTTAG
AATTAGGCAGACCCAGAGTTGGAATGT