TM-1 x 3-79, RIL (2014)

Map Overview

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NameTM-1 x 3-79, RIL (2014)
SpeciesGossypium hirsutum x barbadense
Map typegenetic
Population typeRIL
Map unitcM
Maternal parentTM-1
Paternal parent3-79
Population size186
Number of loci2486
Number of QTL75
Number of linkage groups26
Publication[view all]
ContactYu, John Z. (Zhi-Hong)
Stock
NameTypeDetails
TM-1 x 3-79, RILpopulation
Alias:T3-RIL
Description:genetic mapping
Population size:186
Alias:ctgpop_000059
Secondary id:cdbpop_000059
Pedigree:TM-1 / 3-79
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Map Loci
This map contains 2,486 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
TM-1 x 3-79, RIL (2014).chr02MUSS0073MUSS073bmarker_locus52.7 cM
TM-1 x 3-79, RIL (2014).chr02UCD_cg10798_80UCcg10798_80marker_locus53.4 cM
TM-1 x 3-79, RIL (2014).chr02COT064COT064amarker_locus53.8 cM
TM-1 x 3-79, RIL (2014).chr02DPL0883DPL0883amarker_locus54.3 cM
TM-1 x 3-79, RIL (2014).chr02MUSB0958MUSB0958emarker_locus54.6 cM
TM-1 x 3-79, RIL (2014).chr02MUSB1178MUSB1178marker_locus55.1 cM
TM-1 x 3-79, RIL (2014).chr02MUSB0888MUSB0888amarker_locus55.6 cM
TM-1 x 3-79, RIL (2014).chr02TMB1025TMB1025bmarker_locus56.3 cM
TM-1 x 3-79, RIL (2014).chr02Gh198Gh198marker_locus56.8 cM
TM-1 x 3-79, RIL (2014).chr02TMB0471TMB0471amarker_locus57.3 cM
TM-1 x 3-79, RIL (2014).chr02MUSB0194musb0194marker_locus57.5 cM
TM-1 x 3-79, RIL (2014).chr02TMB0514TMB0514marker_locus57.8 cM
TM-1 x 3-79, RIL (2014).chr02UCD_cg10587_240UCcg10587_240marker_locus57.9 cM
TM-1 x 3-79, RIL (2014).chr02DPL0216DPL0216marker_locus57.9 cM
TM-1 x 3-79, RIL (2014).chr02MUCS0106MUCS106amarker_locus58 cM
TM-1 x 3-79, RIL (2014).chr02DPL0041DPL0041bmarker_locus58.1 cM
TM-1 x 3-79, RIL (2014).chr02DPL0200DPL0200amarker_locus58.1 cM
TM-1 x 3-79, RIL (2014).chr02MUSS0599MUSS599marker_locus60 cM
TM-1 x 3-79, RIL (2014).chr02BNL3971BNL3971marker_locus60.2 cM
TM-1 x 3-79, RIL (2014).chr02MUCS0620MUCS620marker_locus60.4 cM
TM-1 x 3-79, RIL (2014).chr02C2-00048C2-0048marker_locus60.5 cM
TM-1 x 3-79, RIL (2014).chr02JESPR0101JESPR101amarker_locus60.9 cM
TM-1 x 3-79, RIL (2014).chr02BNL3590BNL3590amarker_locus61.5 cM
TM-1 x 3-79, RIL (2014).chr02DC40319DC40319marker_locus62.2 cM
TM-1 x 3-79, RIL (2014).chr02MUSB0915MUSB0915marker_locus62.5 cM
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Map QTL
This map contains 75 QTL:
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Linkage GroupNameTypeStartStopPeak
TM-1 x 3-79, RIL (2014).chr19qUQLW.T3-RIL_ch19.csQTL48.2 cM48.3 cM48.2 cM
TM-1 x 3-79, RIL (2014).chr19qFNS.T3-RIL_ch19.shQTL90.6 cM91.2 cM90.6 cM
TM-1 x 3-79, RIL (2014).chr19qFF.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFIM.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFM.T3-RIL_ch19.shQTL96.2 cM97.6 cM96.2 cM
TM-1 x 3-79, RIL (2014).chr19qFEL.T3-RIL_ch19.csQTL140.7 cM141.8 cM143 cM
TM-1 x 3-79, RIL (2014).chr19qSI.T3-RIL_ch19.shQTL160.5 cM161.9 cM160.4 cM
TM-1 x 3-79, RIL (2014).chr20qLVFM.T3-RIL_ch20.shQTL10.5 cM11.8 cM10.5 cM
TM-1 x 3-79, RIL (2014).chr21qFEL.T3-RIL_ch21.1.csQTL0 cM6.9 cM1.5 cM
TM-1 x 3-79, RIL (2014).chr21qFLW.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qSL2.5.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qSL50.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qUQLW.T3-RIL_ch21.csQTL19.2 cM20 cM19.2 cM
TM-1 x 3-79, RIL (2014).chr21qFEL.T3-RIL_ch21.2.csQTL55.2 cM56.2 cM55.1 cM
TM-1 x 3-79, RIL (2014).chr21qLY.T3-RIL_ch21.csQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qSCY.T3-RIL_ch21.1.bbQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qSCY.T3-RIL_ch21.2.csQTL94.9 cM95 cM94.8 cM
TM-1 x 3-79, RIL (2014).chr21qGTO.T3-RIL_ch21.shQTL108.9 cM109.9 cM108.8 cM
TM-1 x 3-79, RIL (2014).chr21qLI.T3-RIL_ch21.shQTL108.9 cM109.9 cM108.8 cM
TM-1 x 3-79, RIL (2014).chr22qGTO.T3-RIL_ch22.csQTL82.1 cM82.2 cM81.9 cM
TM-1 x 3-79, RIL (2014).chr23qFS.T3-RIL_ch23.bbQTL42.7 cM43.8 cM42.7 cM
TM-1 x 3-79, RIL (2014).chr23qSTEMD.T3-RIL_ch23.csQTL83.1 cM84.7 cM83.1 cM
TM-1 x 3-79, RIL (2014).chr24qLVFM.T3-RIL_ch14.shQTL15.7 cM18.5 cM15.6 cM
TM-1 x 3-79, RIL (2014).chr25qFF.T3-RIL_ch25.shQTL50.4 cM50.9 cM50.3 cM
TM-1 x 3-79, RIL (2014).chr25qFS.T3-RIL_ch25.shQTL69.1 cM70.5 cM69.1 cM
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