TN-RIL-79

Germplasm Overview


Name	TN-RIL-79
Alias	N/A
GRIN ID	N/A
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	recombinant inbred line (RIL) of TM-1 x NM24016
Origin Country	N/A
Origin Detail	New Mexico, USA
Pedigree	TM-1/NM24016 RIL
Maternal Parent	TM-1
Paternal Parent	NM24016
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	[view all 252]
SNP Genotype Data	[view all 491]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	PRG-6-124

Alias


Synonym
NM79

Ssr Genotype Data

Total 252 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	TN-RIL (F5:9) SSR genotype	bnl2733	genetic_marker	99\|99	bnl2733_99; bnl2733_99
2	TN-RIL (F5:9) SSR genotype	cot104	genetic_marker	374\|374	cot104_374; cot104_374
3	TN-RIL (F5:9) SSR genotype	dpl0811	genetic_marker	231\|231	dpl0811_231; dpl0811_231
4	TN-RIL (F5:9) SSR genotype	dpl0346	genetic_marker	226\|226	dpl0346_226; dpl0346_226
5	TN-RIL (F5:9) SSR genotype	bnl2884	genetic_marker	161\|161	bnl2884_161; bnl2884_161
6	TN-RIL (F5:9) SSR genotype	musb1117	genetic_marker	222\|222	musb1117_222; musb1117_222
7	TN-RIL (F5:9) SSR genotype	dpl1130	genetic_marker	248\|248	dpl1130_248; dpl1130_248
8	TN-RIL (F5:9) SSR genotype	dpl0442	genetic_marker	147\|147	dpl0442_147; dpl0442_147
9	TN-RIL (F5:9) SSR genotype	dpl0522	genetic_marker	243\|243	dpl0522_243; dpl0522_243
10	TN-RIL (F5:9) SSR genotype	dpl1268	genetic_marker	258\|258	dpl1268_258; dpl1268_258
11	TN-RIL (F5:9) SSR genotype	dpl0131	genetic_marker	198\|198	dpl0131_198; dpl0131_198
12	TN-RIL (F5:9) SSR genotype	dpl1514	genetic_marker	191\|191	dpl1514_191; dpl1514_191
13	TN-RIL (F5:9) SSR genotype	dpl0702	genetic_marker	211\|211	dpl0702_211; dpl0702_211
14	TN-RIL (F5:9) SSR genotype	dpl0404	genetic_marker	102\|102	dpl0404_102; dpl0404_102
15	TN-RIL (F5:9) SSR genotype	dpl0113	genetic_marker	216\|216	dpl0113_216; dpl0113_216
16	TN-RIL (F5:9) SSR genotype	shin-0473	genetic_marker	194\|194	shin-0473_194; shin-0473_194
17	TN-RIL (F5:9) SSR genotype	dpl1283	genetic_marker	249\|249	dpl1283_249; dpl1283_249
18	TN-RIL (F5:9) SSR genotype	dpl1931	genetic_marker	323\|323	dpl1931_323; dpl1931_323
19	TN-RIL (F5:9) SSR genotype	dpl1379	genetic_marker	165\|165	dpl1379_165; dpl1379_165
20	TN-RIL (F5:9) SSR genotype	bnl3545	genetic_marker	115\|115	bnl3545_115; bnl3545_115
21	TN-RIL (F5:9) SSR genotype	shin-0396	genetic_marker	152\|152	shin-0396_152; shin-0396_152
22	TN-RIL (F5:9) SSR genotype	bnl2499	genetic_marker	246\|246	bnl2499_246; bnl2499_246
23	TN-RIL (F5:9) SSR genotype	dpl0252	genetic_marker	173\|173	dpl0252_173; dpl0252_173
24	TN-RIL (F5:9) SSR genotype	dc40113	genetic_marker	303\|303	dc40113_303; dc40113_303
25	TN-RIL (F5:9) SSR genotype	cir0383	genetic_marker	106\|106	cir0383_106; cir0383_106

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Publications


Year	Publication
2012	Gore MA; Percy RG; Zhang JF; Fang DD; Cantrell RG. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population. Journal of Plant Registrations. 2012; 6(1):124-127.

Snp Genotype Data

Total 491 records

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#	Dataset	Marker Name	Allele	Genotype
1	TN-RIL (F:9) SNP genotype	USDA_SNP0201	C/T	-\|-
2	TN-RIL (F:9) SNP genotype	USDA_SNP0202	A/G	-\|-
3	TN-RIL (F:9) SNP genotype	USDA_SNP0203	C/T	T\|T
4	TN-RIL (F:9) SNP genotype	USDA_SNP0204	G/T	-\|-
5	TN-RIL (F:9) SNP genotype	USDA_SNP0205	A/G	G\|G
6	TN-RIL (F:9) SNP genotype	USDA_SNP0206	A/C	C\|C
7	TN-RIL (F:9) SNP genotype	USDA_SNP0207	C/T	C\|C
8	TN-RIL (F:9) SNP genotype	USDA_SNP0208	A/T	-\|-
9	TN-RIL (F:9) SNP genotype	USDA_SNP0209	C/T	C\|C
10	TN-RIL (F:9) SNP genotype	USDA_SNP0210	C/G	G\|G
11	TN-RIL (F:9) SNP genotype	USDA_SNP0211	C/T	C\|C
12	TN-RIL (F:9) SNP genotype	USDA_SNP0212	A/C	A\|A
13	TN-RIL (F:9) SNP genotype	USDA_SNP0213	C/T	C\|C
14	TN-RIL (F:9) SNP genotype	USDA_SNP0214	A/G	G\|G
15	TN-RIL (F:9) SNP genotype	USDA_SNP0215	T/A	A\|A
16	TN-RIL (F:9) SNP genotype	USDA_SNP0216	C/T	-\|-
17	TN-RIL (F:9) SNP genotype	USDA_SNP0217	C/T	-\|-
18	TN-RIL (F:9) SNP genotype	USDA_SNP0218	A/C	C\|C
19	TN-RIL (F:9) SNP genotype	USDA_SNP0219	A/G	G\|G
20	TN-RIL (F:9) SNP genotype	USDA_SNP0220	A/C	C\|C
21	TN-RIL (F:9) SNP genotype	USDA_SNP0221	C/T	-\|-
22	TN-RIL (F:9) SNP genotype	USDA_SNP0222	C/T	T\|T
23	TN-RIL (F:9) SNP genotype	USDA_SNP0223	A/G	G\|G
24	TN-RIL (F:9) SNP genotype	USDA_SNP0224	C/T	C\|C
25	TN-RIL (F:9) SNP genotype	USDA_SNP0225	A/G	-\|-

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