TN-RIL-78

Germplasm Overview


Name	TN-RIL-78
Alias	N/A
GRIN ID	N/A
Type	Breeding Germplasm
Species	Gossypium hirsutum
Description	recombinant inbred line (RIL) of TM-1 x NM24016
Origin Country	N/A
Origin Detail	New Mexico, USA
Pedigree	TM-1/NM24016 RIL
Maternal Parent	N/A
Paternal Parent	NM24016
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	N/A
SSR Genotype Data	[view all 252]
SNP Genotype Data	[view all 491]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	PRG-6-124

Alias


Synonym
NM78

Ssr Genotype Data

Total 252 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	TN-RIL (F5:9) SSR genotype	dpl0755	genetic_marker	189\|189	dpl0755_189; dpl0755_189
2	TN-RIL (F5:9) SSR genotype	dpl0687	genetic_marker	115\|115	dpl0687_115; dpl0687_115
3	TN-RIL (F5:9) SSR genotype	cir0293	genetic_marker	300\|300	cir0293_300; cir0293_300
4	TN-RIL (F5:9) SSR genotype	dpl1308	genetic_marker	x\|x	dpl1308_x; dpl1308_x
5	TN-RIL (F5:9) SSR genotype	bnl0625	genetic_marker	229\|229	bnl0625_229; bnl0625_229
6	TN-RIL (F5:9) SSR genotype	bnl3599	genetic_marker	214\|214	bnl3599_214; bnl3599_214
7	TN-RIL (F5:9) SSR genotype	shin-0460	genetic_marker	235\|235	shin-0460_235; shin-0460_235
8	TN-RIL (F5:9) SSR genotype	bnl2961	genetic_marker	x\|x	bnl2961_x; bnl2961_x
9	TN-RIL (F5:9) SSR genotype	shin-0008	genetic_marker	216\|216	shin-0008_216; shin-0008_216
10	TN-RIL (F5:9) SSR genotype	cir0353	genetic_marker	166\|166	cir0353_166; cir0353_166
11	TN-RIL (F5:9) SSR genotype	bnl3994	genetic_marker	94\|94	bnl3994_94; bnl3994_94
12	TN-RIL (F5:9) SSR genotype	cm0071	genetic_marker	119\|119	cm0071_119; cm0071_119
13	TN-RIL (F5:9) SSR genotype	bnl3835	genetic_marker	191\|191	bnl3835_191; bnl3835_191
14	TN-RIL (F5:9) SSR genotype	jespr0190	genetic_marker	146\|146	jespr0190_146; jespr0190_146
15	TN-RIL (F5:9) SSR genotype	mucs0546	genetic_marker	184\|184	mucs0546_184; mucs0546_184
16	TN-RIL (F5:9) SSR genotype	cot130	genetic_marker	142\|142	cot130_142; cot130_142
17	TN-RIL (F5:9) SSR genotype	jespr0050	genetic_marker	199\|199	jespr0050_199; jespr0050_199
18	TN-RIL (F5:9) SSR genotype	dpl0168	genetic_marker	236\|236	dpl0168_236; dpl0168_236
19	TN-RIL (F5:9) SSR genotype	dpl0248	genetic_marker	173\|173	dpl0248_173; dpl0248_173
20	TN-RIL (F5:9) SSR genotype	dc40044	genetic_marker	270\|270	dc40044_270; dc40044_270
21	TN-RIL (F5:9) SSR genotype	cir0030	genetic_marker	273\|273	cir0030_273; cir0030_273
22	TN-RIL (F5:9) SSR genotype	dpl0119	genetic_marker	148\|148	dpl0119_148; dpl0119_148
23	TN-RIL (F5:9) SSR genotype	shin-0727	genetic_marker	168\|197	shin-0727_168; shin-0727_197
24	TN-RIL (F5:9) SSR genotype	nau2152	genetic_marker	197\|203	nau2152_197; nau2152_203
25	TN-RIL (F5:9) SSR genotype	bnl0226	genetic_marker	229\|229	bnl0226_229; bnl0226_229

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Publications


Year	Publication
2012	Gore MA; Percy RG; Zhang JF; Fang DD; Cantrell RG. Registration of the TM-1/NM24016 Cotton Recombinant Inbred Mapping Population. Journal of Plant Registrations. 2012; 6(1):124-127.

Snp Genotype Data

Total 491 records

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#	Dataset	Marker Name	Allele	Genotype
1	TN-RIL (F:9) SNP genotype	USDA_SNP0226	A/C	-\|-
2	TN-RIL (F:9) SNP genotype	USDA_SNP0227	C/T	-\|-
3	TN-RIL (F:9) SNP genotype	USDA_SNP0228	C/T	T\|T
4	TN-RIL (F:9) SNP genotype	USDA_SNP0229	C/G	G\|G
5	TN-RIL (F:9) SNP genotype	USDA_SNP0230	C/T	-\|-
6	TN-RIL (F:9) SNP genotype	USDA_SNP0231	A/G	A\|A
7	TN-RIL (F:9) SNP genotype	USDA_SNP0232	A/G	A\|A
8	TN-RIL (F:9) SNP genotype	USDA_SNP0233	C/G	-\|-
9	TN-RIL (F:9) SNP genotype	USDA_SNP0234	G/A	-\|-
10	TN-RIL (F:9) SNP genotype	USDA_SNP0235	G/T	G\|G
11	TN-RIL (F:9) SNP genotype	USDA_SNP0236	A/G	G\|G
12	TN-RIL (F:9) SNP genotype	USDA_SNP0237	A/G	-\|-
13	TN-RIL (F:9) SNP genotype	USDA_SNP0238	G/T	G\|G
14	TN-RIL (F:9) SNP genotype	USDA_SNP0239	C/T	C\|C
15	TN-RIL (F:9) SNP genotype	USDA_SNP0240	C/T	-\|-
16	TN-RIL (F:9) SNP genotype	USDA_SNP0241	A/G	A\|A
17	TN-RIL (F:9) SNP genotype	USDA_SNP0242	A/G	-\|-
18	TN-RIL (F:9) SNP genotype	USDA_SNP0243	C/T	C\|C
19	TN-RIL (F:9) SNP genotype	USDA_SNP0244	A/C	A\|A
20	TN-RIL (F:9) SNP genotype	USDA_SNP0245	A/T	A\|A
21	TN-RIL (F:9) SNP genotype	USDA_SNP0246	A/C	A\|A
22	TN-RIL (F:9) SNP genotype	USDA_SNP0247	A/G	A\|A
23	TN-RIL (F:9) SNP genotype	USDA_SNP0248	A/T	-\|-
24	TN-RIL (F:9) SNP genotype	USDA_SNP0249	C/T	T\|T
25	TN-RIL (F:9) SNP genotype	USDA_SNP0250	G/T	G\|G

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