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Marker Overview
Name | BNL3835 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3835_orig
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Source Type | genomic |
Repeat Motif | (TG)18 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3835_F: ATTTGGTCATTTTGGTGTATGG |
Primer 2 | BNL3835_R: TGCATAATAAAGGGCATTTACA |
Polymorphism | P_ BNL3835 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch12_At.12 | N/A | 63.4 | BNL3835 | View |
2 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch12_At.12 | N/A | 101.01 | BNL3835 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch04_At.04 | N/A | 48.52 | BNL3835 | View |
4 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch04_At.04 | N/A | 30 | BNL3835 | View |
5 | AD-genome wide Reference Map (2009) | AD_ch04_At.04 | N/A | 86 | BNL3835 | View |
6 | TM-1 x 3-79, RIL (2012) | AD_ch12_At.12 | N/A | 47.72 | BNL3835 | View |
7 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch12_At.12 | N/A | 152.9 | BNL3835 | View |
8 | AD-genome wide Reference Map (2009) | AD_ch12_At.12 | N/A | 168 | BNL3835 | View |
9 | DH962 x Jinmian-6, F2 (2009) | AD_ch12_At.12 | N/A | 27.3 | BNL3835 | View |
10 | DH962 x Jinmian-6, F2 (2009) | AD_ch12_At.12 | N/A | 27.3 | BNL3835 | View |
11 | Yumian-1 x 7235, RIL (2015) | AD_ch12_At.12 | N/A | 100.2 | BNL3835 | View |
12 | DH962 X Ji Mian 5, F2 (2015) | AD_ch12_At.12 | N/A | 27.82 | BNL3835 | View |
13 | TM-1 x 3-79, RIL (2014) | AD_ch12_At.12 | N/A | 47.7 | BNL3835 | View |
14 | DH962 x Ji Mian 5, RIL (2015) | AD_ch12_At.12 | N/A | 7.1 | BNL3835 | View |
15 | Monsanto SSR Bin Map, (2009) | AD_ch12_At.12 | N/A | 61 | BNL3835 | View |
16 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch04_At.04 | N/A | 95.9 | BNL3835b | View |
17 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch12_At.12 | N/A | 140.4 | BNL3835a | View |
18 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch12_At.12 | N/A | 30 | BNL3835-188 | View |
19 | TM-1 x 3-79, RIL (2012.v3) | AD_ch12_At.12 | N/A | 47.72 | BNL3835 | View |
Sequence
>BNL3835 ID=BNL3835; Name=BNL3835; organism=Gossypium hirsutum; type=genetic_marker; length=187bp ATTTGGTCATTTTGGTGTATGGTTTGGTAATGAATTTAGCCATTTATGTT GGCTTGTAAATGTTAAGTGTTTGGTTTTTTATATAGCCATGAGAGTTGGC TTATTTTGGCATATTTGGTTGTGCATATATATGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTAAATGCCCTTTATTATGCA
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