Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	BNL3090	BNL3090a	marker_locus	168.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	G1097	G1097	marker_locus	183.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	A1204	A1204u	marker_locus	183.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	BNL3888	BNL3888	marker_locus	185.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	E5M6_77	E5M6_77	marker_locus	190.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	CG09	CG09a	marker_locus	191.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	CIR0241	CIR241	marker_locus	195 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	CIR0114	CIR114	marker_locus	196.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	BNL3580	BNL3580	marker_locus	196.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	E5M8_228	E5M8_228	marker_locus	214.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	pAR0077	pAR077b	marker_locus	215.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	CIR0381	CIR381a	marker_locus	0 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	pAR0723	pAR723a	marker_locus	15.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	BNL1434	BNL1434b	marker_locus	15.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M1_164	E3M1_164	marker_locus	27.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	Unig25A02	Unig25A02	marker_locus	33.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E5M6_252	E5M6_252	marker_locus	35.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	BNL1897	BNL1897a	marker_locus	35.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	JESPR0179	JESPR179a	marker_locus	51.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	CIR0184	CIR184	marker_locus	55.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	BNL3590	BNL3590	marker_locus	57.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M7_450	E3M7_450	marker_locus	58.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E5M1_224	E5M1_224	marker_locus	58.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	JESPR0250	JESPR250a	marker_locus	58.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	CG24	CG24c	marker_locus	58.9 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qCRD.GV-BC1_ch25.1	QTL	48.7 cM	71.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qCRD.GV-BC1_ch25.2	QTL	64.3 cM	75.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qCRD.GV-BC1_ch06	QTL	125.3 cM	126.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr07	qCRD.GV-BC1_ch07	QTL	131.4 cM	132.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qCRD.GV-BC1_ch08	QTL	176.6 cM	179.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr09	qCRD.GV-BC1_ch09.1	QTL	229.4 cM	259.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr09	qCRD.GV-BC1_ch09.2	QTL	311.7 cM	312.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr10	qFEL.GV-BC1_ch10	QTL	109.8 cM	118.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr15	qFEL.GV-BC1_ch15	QTL	115.4 cM	116.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr16	qFEL.GV-BC1_ch16	QTL	22.2 cM	29.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr17	qFEL.GV-BC1_ch17.1	QTL	28.9 cM	31.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr17	qFEL.GV-BC1_ch17.2	QTL	43.9 cM	48.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08	qFEL.GV-BC1_ch19.1	QTL	192.7 cM	194.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08	qFEL.GV-BC1_ch19.2	QTL	195.8 cM	198.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qFEL.GV-BC1_ch20.1	QTL	89.5 cM	108.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qFEL.GV-BC1_ch20.2	QTL	116.1 cM	123.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr22	qFEL.GV-BC1_ch22	QTL	12.4 cM	34.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qFEL.GV-BC1_ch23	QTL	71.5 cM	78.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr09	qFEL.GV-BC1_ch09	QTL	215 cM	216 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr10	qML.GV-BC1_ch10	QTL	112.3 cM	113.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qML.GV-BC1_ch13.1	QTL	40.7 cM	46.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qML.GV-BC1_ch13.2	QTL	40.2 cM	41.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr14	qML.GV-BC1_ch14	QTL	37.5 cM	52.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qML.GV-BC1_ch18	QTL	143.3 cM	148.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qML.GV-BC1_ch20	QTL	263.1 cM	264.1 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)