|
|
Cross References
External references for this genetic_marker
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Germplasm
| Stock Name | Type |
|---|
| T-25 | accession |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | A1-97 x A2-47, F2 (1999) | A_AA_lg05 | N/A | 94 | pAR77 | View |
| 2 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch01_At.01 | N/A | 0 | pAR0077b | View |
| 3 | Palmeri x K-101, F2 (2007) | AD_ch15_Dt.01 | N/A | 81.1 | pAR0077b | View |
| 4 | Pima S-7 x Empire, F2 (2007) | AD_ch15_Dt.01 | N/A | 60.9 | pAR0077b | View |
| 5 | Pima S-7 x im, F2 (2007) | AD_ch15_Dt.01 | N/A | 0 | pAR0077b | View |
| 6 | Sic'on x F-177, F2 (2004) | AD_ch01_At.01 | N/A | 212.7 | pAR0077b | View |
| 7 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch15_Dt.01 | N/A | 25.4 | pAR0077a | View |
| 8 | Pima S-7 x Empire, F2 (2007) | AD_ch01_At.01 | N/A | 48.6 | pAR0077a | View |
| 9 | Sic'on x F-177, F2 (2004) | AD_ch15_Dt.01 | N/A | 218.4 | pAR0077a | View |
| 10 | Gtr x Gra, F2 (2004) | D.01 | N/A | 94.6 | pAR0077 | View |
| 11 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 188 | pAR0077 | View |
| 12 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 178 | pAR0077 | View |
| 13 | SMA-4 x A1-97, F2 (2005) | A_SA_lg05 | N/A | 29 | pAR0077 | View |
| 14 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch01_At.01 | N/A | 215.7 | pAR077b | View |
| 15 | Palmeri x K-101, F2 (2007) | AD_ch15_Dt.01 | N/A | 96.7 | pAR077b | View |
| 16 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch15_Dt.01 | N/A | 158.5 | pAR077a | View |
| 17 | Palmeri x K-101, F2 (2007) | AD_ch01_At.01 | N/A | 142.1 | pAR077a | View |
| 18 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch01_At.01 | N/A | 128.27 | pAR077 | View |
| 19 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch15_Dt.01 | N/A | 117.31 | pAR077 | View |
| 20 | Palmeri x K-101, F2 (2007) | AD_ch15_Dt.01 | N/A | 111.9 | pAR0077c | View |
| 21 | Pima S-7 x im, F2 (2007) | AD_ch15_Dt.01 | N/A | 20.5 | pAR0077c | View |
Sequence
>pAR0077 ID=pAR0077; Name=pAR0077; organism=Gossypium hirsutum; type=genetic_marker; length=1025bp
CACCACCCTTTTTCCCCTTTTGTTTTTAAAAAAAAATTTCCCAAAAGGGG
ACCGGGGGCCAACTTTTTTTTTCCTTACCCTTTTAACTAAAGGAAACAAA
ACCTTGTTCCCAAAAAAAAAAAAAACCCGTATTTTTTTGCCTTAAAGGCA
AGGCAAAGGTTTTTTTTTTTTTTGGGGCCCCAACTAAGTTAATTTGGGAA
TTGGTTGGGTTAAAGTGGCCCCCCCTTAATTTTTAGGACTTTCCATTTTG
GGGGCCGGCCAAGGATAAGGACTGTCCCTTTTTGTAACAATGGGGCCCCA
AGGGTTTTTTTTAAGGAAACGAAACCCGTTAAACGCCTTGGTTAGCTCGA
ACTCCTCGCGCAGCATCGAAAGCCTTTTCCTCACGCCAGTTTTTCTTTAA
GAAGCCAATGAGAACACCACTGGTCGCCCAATAAATTTCCCAGAGGCTCC
CAATGCCAAAGCTTTAAAAACATCGGTTCCACGCCGAACACCACCGTCCA
AGAAGACAGGAACCCGACCTTGAGCAGCTTTGACAACCTCTTCCAGGGCC
ATGATAGTGGCAGGAACGTAATCAAGTTGGCGAGCTCCGTGGTTGGAGAC
GATGATACCGGCTGCTCCAGCCTGTATCGCTATCCTTGTATCTTCAGCCG
TGAGTACACCCTTCACAAGAATTGGCAATTTGGTGATTGTTTGAAGCCAT
TTCACATCCTTCCAGCTAAGGGAACGATCGATTTGTCCGGCAACGTACGA
AGCAAGACCCGAATCATCAGCTTGATCCATCTTGCCAAGGTCCAAACCTT
CAAAGTTCTTCAATGTCAAAAATGGTGGTAAAGTGAACCTGTTCTTGATA
TCAGCTTCTCTGCGACCGAGTCTCGGAGTATCAACTGTAAGGGCAATTGC
CTTGAAACCAGCCCTCTCGGCTCTTCTAACGAGCTGTGCAACCTCGTGCC
GAATTCCCTGCAGTCCCGGGGGATNCCACTAGTNCTAGATGCGGTCCGCC
CACCAACGGTGGAAGTCTCCCAGTC
|
