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Stock
Name | Type | Details |
Pima S-7 x im, F2 | population | Alias: | im-F2 | Description: | genetic mapping | Population size: | 124 | Secondary id: | cdbpop_000053 | Pedigree: | im, Gh / Pima S-7 |
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Publication
Year | Publications |
2007 | Rong J, Feltus FA, Waghmare VN, Pierce GJ, Chee PW, Draye X, Saranga Y, Wright RJ, Wilkins TA, May OL, Smith CW, Gannaway JR, Wendel JF, Paterson AH. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development. Genetics. 2007 Aug; 176(4):2577-88 |
Map Loci
This map contains 364 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Pima S-7 x im, F2 (2007).chr01 | A1126 | A1126a | marker_locus | 0 cM |
Pima S-7 x im, F2 (2007).chr01 | Gate4CA01 | Gate4CA01 | marker_locus | 12.7 cM |
Pima S-7 x im, F2 (2007).chr01 | pAR0121 | PAR0121 | marker_locus | 23.8 cM |
Pima S-7 x im, F2 (2007).chr01 | G1051 | G1051a | marker_locus | 27.3 cM |
Pima S-7 x im, F2 (2007).chr01 | Unig23C08 | Unig23C08 | marker_locus | 44.6 cM |
Pima S-7 x im, F2 (2007).chr01 | pAR0274 | pAR0274a | marker_locus | 66.3 cM |
Pima S-7 x im, F2 (2007).chr01 | A1686 | A1686 | marker_locus | 93.1 cM |
Pima S-7 x im, F2 (2007).chr01 | pAR0883 | pAR0883a | marker_locus | 93.7 cM |
Pima S-7 x im, F2 (2007).chr01 | Coau2C11 | Coau2C11a | marker_locus | 95 cM |
Pima S-7 x im, F2 (2007).chr01 | pAR0450 | pAR0450 | marker_locus | 95 cM |
Pima S-7 x im, F2 (2007).chr01 | Gate1AB12 | Gate1AB12 | marker_locus | 96.7 cM |
Pima S-7 x im, F2 (2007).chr01 | Coau2M13 | Coau2M13a | marker_locus | 99.2 cM |
Pima S-7 x im, F2 (2007).chr01 | A1591 | A1591a | marker_locus | 99.8 cM |
Pima S-7 x im, F2 (2007).chr01 | pAR0274 | pAR0274b | marker_locus | 109.1 cM |
Pima S-7 x im, F2 (2007).chr01 | Gafb26N16 | Gafb26N16a | marker_locus | 111.7 cM |
Pima S-7 x im, F2 (2007).chr01 | pGH468 | pGH468a | marker_locus | 122.7 cM |
Pima S-7 x im, F2 (2007).chr01 | Unig25B08 | Unig25B08 | marker_locus | 149.6 cM |
Pima S-7 x im, F2 (2007).chr02 | Unig25A02 | Unig25A02a | marker_locus | 0 cM |
Pima S-7 x im, F2 (2007).chr02 | PXP4-65 | PXP4-65a | marker_locus | 12.6 cM |
Pima S-7 x im, F2 (2007).chr02 | Gate4AD09 | Gate4AD09 | marker_locus | 22.5 cM |
Pima S-7 x im, F2 (2007).chr02 | Gate4BG11 | Gate4BG11a | marker_locus | 29.3 cM |
Pima S-7 x im, F2 (2007).chr02 | Gate3BA04 | Gate3BA04a | marker_locus | 34.1 cM |
Pima S-7 x im, F2 (2007).chr02 | Unig24G02 | Unig24G02a | marker_locus | 37 cM |
Pima S-7 x im, F2 (2007).chr02 | Gate3BA04 | Gate3BA04b | marker_locus | 42.5 cM |
Pima S-7 x im, F2 (2007).chr02 | Unig27G05 | Unig27G05 | marker_locus | 77.8 cM |
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Map QTL
This map contains 51 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Pima S-7 x im, F2 (2007).chr01 | qSTGL.im-F2_ch01 | QTL | 129.6 cM | 139.6 cM | - |
Pima S-7 x im, F2 (2007).chr01 | qSTGPL.im-F2_ch01 | QTL | 134.7 cM | 149.6 cM | - |
Pima S-7 x im, F2 (2007).chr02 | qSTGL.im-F2_ch02 | QTL | 5 cM | 19 cM | - |
Pima S-7 x im, F2 (2007).chr02 | qFU.im-F2_ch02 | QTL | 9.9 cM | 14.7 cM | - |
Pima S-7 x im, F2 (2007).chr02 | qMIC.im-F2_ch02 | QTL | 11.9 cM | 37.3 cM | - |
Pima S-7 x im, F2 (2007).chr02 | qUHML.im-F2_ch02 | QTL | 24.3 cM | 30 cM | - |
Pima S-7 x im, F2 (2007).chr02 | qFS.im-F2_ch02 | QTL | 28.4 cM | 74.8 cM | - |
Pima S-7 x im, F2 (2007).chr03 | qFLBL.im-F2_ch03 | QTL | 11 cM | 34 cM | - |
Pima S-7 x im, F2 (2007).chr04 | qPTLL.im-F2_ch04 | QTL | 5 cM | 19.6 cM | - |
Pima S-7 x im, F2 (2007).chr05 | qSTGL.im-F2_ch05 | QTL | 30 cM | 60 cM | - |
Pima S-7 x im, F2 (2007).chr05.1 | qFS.im-F2_ch05 | QTL | 33 cM | 34.2 cM | - |
Pima S-7 x im, F2 (2007).chr06 | qPTLL.im-F2_ch06 | QTL | 12 cM | 35 cM | - |
Pima S-7 x im, F2 (2007).chr06 | qGYNOL.im-F2_ch06 | QTL | 28 cM | 41 cM | - |
Pima S-7 x im, F2 (2007).chr07.2 | qFLBL.im-F2_ch07 | QTL | 11.3 cM | 25.1 cM | - |
Pima S-7 x im, F2 (2007).chr07.1 | qPTLSP.im-F2_ch07 | QTL | 35.4 cM | 50.2 cM | - |
Pima S-7 x im, F2 (2007).chr08/lgA02 | qUHML.im-F2_ch08 | QTL | 16.7 cM | 47.1 cM | - |
Pima S-7 x im, F2 (2007).chr08/lgA02 | qFEL.im-F2_ch08 | QTL | 23.3 cM | 40.1 cM | - |
Pima S-7 x im, F2 (2007).chr08/lgA02 | qFS.im-F2_ch08 | QTL | 122.6 cM | 140 cM | - |
Pima S-7 x im, F2 (2007).chr11/lgA03.1 | qFU.im-F2_ch11 | QTL | 5.1 cM | 14.3 cM | - |
Pima S-7 x im, F2 (2007).chr11/lgA03 | qFL.im-F2_ch11 | QTL | 50.5 cM | 56.3 cM | - |
Pima S-7 x im, F2 (2007).chr12 | qFLBL.im-F2_ch12 | QTL | 215.8 cM | 233.9 cM | - |
Pima S-7 x im, F2 (2007).chr13/lgA01 | qGYNOL.im-F2_ch13 | QTL | 102.6 cM | 137 cM | - |
Pima S-7 x im, F2 (2007).chr13/lgA01 | qPTLL.im-F2_ch13 | QTL | 102.6 cM | 143.5 cM | - |
Pima S-7 x im, F2 (2007).chr13/lgA01 | qFLBL.im-F2_ch13 | QTL | 105.1 cM | 143.5 cM | - |
Pima S-7 x im, F2 (2007).chr14 | qSTGL.im-F2_ch14 | QTL | 37.7 cM | 57.5 cM | - |
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