Pima S-7 x im, F2 (2007) | Cottongen

Map Overview


Name	Pima S-7 x im, F2 (2007)
Species	Gossypium barbadense x hirsutum
Population type	F2
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	im Gh
Paternal parent	Pima S-7
Population size	124
Number of loci	364
Number of QTL	51
Number of linkage groups	39
Publication	[view all]
Contact	Paterson, Andrew H.

Stock

Name

Type

Details

Pima S-7 x im, F2

population

Alias:	im-F2
Description:	genetic mapping
Population size:	124
Secondary id:	cdbpop_000053
Pedigree:	im, Gh / Pima S-7

Contact

Name

Details

Paterson, Andrew H.

First name:	Andrew
Last name:	Paterson
Title:	Director
Institution:	Univ. GA, Plant Genome Mapping Laboratory
Address:	111 Riverbend Road, Rm 228, Athens, GA 30602
Country:	United States
Email:	paterson@uga.edu
Last update:	19-Feb-2007

Publication


Year	Publications
2007	Rong J, Feltus FA, Waghmare VN, Pierce GJ, Chee PW, Draye X, Saranga Y, Wright RJ, Wilkins TA, May OL, Smith CW, Gannaway JR, Wendel JF, Paterson AH. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development. Genetics. 2007 Aug; 176(4):2577-88

Map Loci

This map contains 364 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Pima S-7 x im, F2 (2007).chr26	Unig06C06	Unig06C06	marker_locus	50.6 cM
Pima S-7 x im, F2 (2007).chr26	A1776	A1776	marker_locus	51 cM
Pima S-7 x im, F2 (2007).chr26	pAR0219	pAR0219b	marker_locus	78.4 cM
Pima S-7 x im, F2 (2007).chr26	pAR01C06	PAR01C06b	marker_locus	99.6 cM
Pima S-7 x im, F2 (2007).chr26	pAR0883	pAR0883b	marker_locus	101.5 cM
Pima S-7 x im, F2 (2007).chr26	Gate1CD11	Gate1CD11	marker_locus	102.2 cM
Pima S-7 x im, F2 (2007).chr26	Gate3BG09	Gate3BG09d	marker_locus	108.6 cM
Pima S-7 x im, F2 (2007).chr26	Gate4DC07	Gate4DC07a	marker_locus	114.8 cM
Pima S-7 x im, F2 (2007).chr26	A1719	A1719b	marker_locus	116.9 cM
Pima S-7 x im, F2 (2007).chr26	Coau2M07	Coau2M07	marker_locus	120.9 cM
Pima S-7 x im, F2 (2007).chr26	Gate1CB02	Gate1CB02	marker_locus	136.1 cM
Pima S-7 x im, F2 (2007).chr26	A1685	A1685b	marker_locus	143.9 cM
Pima S-7 x im, F2 (2007).chr26	G1045	G1045	marker_locus	155.1 cM
Pima S-7 x im, F2 (2007).chr26	Gate4CF12	Gate4CF12b	marker_locus	166.1 cM

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Map QTL

This map contains 51 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Pima S-7 x im, F2 (2007).chr26	qFLBL.im-F2_ch26	QTL	143.9 cM	166.1 cM	-

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