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Stock
Name | Type | Details |
Pima S-7 x im, F2 | population | Alias: | im-F2 | Description: | genetic mapping | Population size: | 124 | Secondary id: | cdbpop_000053 | Pedigree: | im, Gh / Pima S-7 |
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Publication
Year | Publications |
2007 | Rong J, Feltus FA, Waghmare VN, Pierce GJ, Chee PW, Draye X, Saranga Y, Wright RJ, Wilkins TA, May OL, Smith CW, Gannaway JR, Wendel JF, Paterson AH. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicated in lint fiber development. Genetics. 2007 Aug; 176(4):2577-88 |
Map Loci
This map contains 364 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Pima S-7 x im, F2 (2007).chr02 | Unig25C09 | Unig25C09 | marker_locus | 100.5 cM |
Pima S-7 x im, F2 (2007).chr02 | pGH248 | pGH248a | marker_locus | 103.4 cM |
Pima S-7 x im, F2 (2007).chr02 | G1128 | G1128 | marker_locus | 104 cM |
Pima S-7 x im, F2 (2007).chr03 | pAR01-56 | pAR1-56a | marker_locus | 0 cM |
Pima S-7 x im, F2 (2007).chr03 | Unig24B07 | Unig24B07 | marker_locus | 16.2 cM |
Pima S-7 x im, F2 (2007).chr03 | A1748 | A1748 | marker_locus | 21.3 cM |
Pima S-7 x im, F2 (2007).chr03 | Unig26E06 | Unig26E06 | marker_locus | 33.6 cM |
Pima S-7 x im, F2 (2007).chr03 | pGH639 | PGH639a | marker_locus | 40 cM |
Pima S-7 x im, F2 (2007).chr03 | Gate3BE04 | Gate3BE04a | marker_locus | 49.3 cM |
Pima S-7 x im, F2 (2007).chr03 | Unig24C11 | Unig24C11a | marker_locus | 60.2 cM |
Pima S-7 x im, F2 (2007).chr03 | A1210 | A1210a | marker_locus | 61 cM |
Pima S-7 x im, F2 (2007).chr03 | PXP3-44 | PXP3-44 | marker_locus | 67.1 cM |
Pima S-7 x im, F2 (2007).chr03 | Unig23D03 | Unig23D03a | marker_locus | 67.1 cM |
Pima S-7 x im, F2 (2007).chr03 | P09-53 | P09-53 | marker_locus | 72.6 cM |
Pima S-7 x im, F2 (2007).chr03 | G1164 | G1164 | marker_locus | 102.9 cM |
Pima S-7 x im, F2 (2007).chr03 | PXP3-89 | PXP3-89a | marker_locus | 109.8 cM |
Pima S-7 x im, F2 (2007).chr03 | Gate3BF12 | Gate3BF12 | marker_locus | 113.6 cM |
Pima S-7 x im, F2 (2007).chr03 | Gate3BG09 | Gate3BG09a | marker_locus | 113.6 cM |
Pima S-7 x im, F2 (2007).chr04 | pAR0903 | pAR0903 | marker_locus | 0 cM |
Pima S-7 x im, F2 (2007).chr04 | pAR0380 | pAR0380 | marker_locus | 10.3 cM |
Pima S-7 x im, F2 (2007).chr04 | pAR0138 | pAR0138a | marker_locus | 19.6 cM |
Pima S-7 x im, F2 (2007).chr04 | Gate3CE04 | Gate3CE04 | marker_locus | 45.8 cM |
Pima S-7 x im, F2 (2007).chr04 | pAR0219 | pAR0219a | marker_locus | 46.9 cM |
Pima S-7 x im, F2 (2007).chr04 | pAR10C12 | pAR10C12a | marker_locus | 50.5 cM |
Pima S-7 x im, F2 (2007).chr04 | Unig25D11 | Unig25D11a | marker_locus | 51.6 cM |
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Map QTL
This map contains 51 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Pima S-7 x im, F2 (2007).chr14 | qFLBL.im-F2_ch14 | QTL | 41.7 cM | 59.5 cM | - |
Pima S-7 x im, F2 (2007).chr14 | qLP.im-F2_ch14 | QTL | 46.6 cM | 53 cM | - |
Pima S-7 x im, F2 (2007).chr15.1 | qPTLL.im-F2_ch15 | QTL | 0 cM | 13 cM | - |
Pima S-7 x im, F2 (2007).chr15.2 | qMIC.im-F2_ch15 | QTL | 36.7 cM | 44.9 cM | - |
Pima S-7 x im, F2 (2007).chr15.2 | qPTLSP.im-F2_ch15 | QTL | 41.6 cM | 49.6 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qFL.im-F2_ch16 | QTL | 37.9 cM | 80.4 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qPTLL.im-F2_ch16.1 | QTL | 47.2 cM | 78.7 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qFLBL.im-F2_ch16 | QTL | 95.2 cM | 110.9 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qGYNOL.im-F2_ch16 | QTL | 97.4 cM | 112 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qPTLL.im-F2_ch16.2 | QTL | 99 cM | 121 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qSTGPL.im-F2_ch16 | QTL | 117 cM | 141 cM | - |
Pima S-7 x im, F2 (2007).chr16 | qSTGL.im-F2_ch16 | QTL | 121 cM | 147 cM | - |
Pima S-7 x im, F2 (2007).chr18 | qGYNOL.im-F2_ch18 | QTL | 4.2 cM | 17 cM | - |
Pima S-7 x im, F2 (2007).chr18 | qSTGL.im-F2_ch18 | QTL | 4.2 cM | 12 cM | - |
Pima S-7 x im, F2 (2007).chr18 | qFEL.im-F2_ch18 | QTL | 29.8 cM | 58 cM | - |
Pima S-7 x im, F2 (2007).chr19/lgD08 | qFLBL.im-F2_ch19 | QTL | 18.5 cM | 31 cM | - |
Pima S-7 x im, F2 (2007).chr19/lgD08 | qFL.im-F2_ch19 | QTL | 122.5 cM | 136.3 cM | - |
Pima S-7 x im, F2 (2007).chr20 | qPTLL.im-F2_ch20 | QTL | 72.5 cM | 86 cM | - |
Pima S-7 x im, F2 (2007).chr21/lgD02 | qFU.im-F2_ch21 | QTL | 0 cM | 4.3 cM | - |
Pima S-7 x im, F2 (2007).chr23 | qFEL.im-F2_ch23 | QTL | 90.1 cM | 116.8 cM | - |
Pima S-7 x im, F2 (2007).chr24/lgD03.1 | qPTLL.im-F2_ch24 | QTL | 0 cM | 16.6 cM | - |
Pima S-7 x im, F2 (2007).chr24/lgD03 | qSTGL.im-F2_ch24 | QTL | 40 cM | 67.4 cM | - |
Pima S-7 x im, F2 (2007).chr25 | qSTGPL.im-F2_ch25 | QTL | 0 cM | 23 cM | - |
Pima S-7 x im, F2 (2007).chr25 | qPTLL.im-F2_ch25 | QTL | 10 cM | 31.7 cM | - |
Pima S-7 x im, F2 (2007).chr25 | qSTGL.im-F2_ch25 | QTL | 10 cM | 37.7 cM | - |
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