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Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Germplasm
| Stock Name | Type |
|---|
| T-25 | accession |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch01_At.01 | N/A | 48.9 | PAR0883 | View |
| 2 | AD-genome wide Reference Map (2009) | AD_ch01_At.01 | N/A | 103 | PAR0883 | View |
| 3 | Sic'on x F-177, F2 (2004) | AD_ch01_At.01 | N/A | 133 | PAR0883 | View |
| 4 | Sic'on x F-177, F2 (2004) | AD_ch15_Dt.01 | N/A | 131.3 | PAR0883 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch15_Dt.01 | N/A | 139 | PAR0883 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch21_Dt.11 | N/A | 54 | PAR0883 | View |
| 7 | AD-genome wide Reference Map (2009) | AD_ch26_Dt.12 | N/A | 110 | PAR0883 | View |
| 8 | Palmeri x K-101, F2 (2007) | AD_ch01_At.01 | N/A | 95.6 | pAR883a | View |
| 9 | Palmeri x K-101, F2 (2007) | AD_ch15_Dt.01 | N/A | 147.9 | pAR883b | View |
| 10 | Pima S-7 x im, F2 (2007) | AD_ch01_At.01 | N/A | 93.7 | pAR0883a | View |
| 11 | Pima S-7 x n2, F2 (2007) | AD_ch01_At.01 | N/A | 87.5 | pAR0883a | View |
| 12 | Pima S-7 x im, F2 (2007) | AD_ch21_Dt.11 | N/A | 64.6 | pAR0883c | View |
| 13 | Pima S-7 x im, F2 (2007) | AD_ch26_Dt.12 | N/A | 101.5 | pAR0883b | View |
| 14 | Pima S-7 x n2, F2 (2007) | AD_ch21_Dt.11 | N/A | 20.7 | pAR0883b | View |
Sequence
>pAR0883 ID=pAR0883; Name=pAR0883; organism=Gossypium hirsutum; type=genetic_marker; length=716bp
GATAAAAAGGAATAGTACCATCATTTCTTAATTATTATAATAACATTAAA
AACATTAAATATACATACCCTTTTATTTTTTACTTACAATCATGAAAACA
GACGCAGAAATTTATATGATGTATGCAACCCCAAAAAGAAATACAGAGAA
CAAACAGTTCCAACAAATTAATAAACCACACAATCTCATAGACATCTTTT
ACTTGAAATGCATTATATTGATTCATTAATGGGGAGCAGTGGTCTCTTTT
TCCTTCTCGTCCTCTGTTTTGGAGTGGTAACCAGGAATTTTCTCCTTGAT
TTTCTCCAAAAATCCCTTCTTCTCTTTTGTCTCTCCCTCATGGTGGTCGT
TCTCAGTTGGGGCAGCAGCAGCTGGTGGTGGGGTGGTGACCTCTTCATCT
TTCTTATGCTGTCCTGGGAGTTTGTCTTTGATCTTCTCCATGAAACCCTT
CTTTTCCGGCGTCTCTGAGTGGTGAACTGTTGCCGCCTCATCGCACTTCT
CCACTGGGACTGCACTGTCCTCTTCTTTCTTTCCCTTCTTCTCCTTTTTC
TTCTTCTTCTTCTCTCCGCCTTCACCTTCACCTTCTTCCTCGTCACTAGA
AGAGCTGGAGCTGCTATTGGATCGGTGAAGCTTGTCCAGGAGACTGTGTT
TCTTCTCATCTTCCTTATGTTCCTCTTCTATCTTGACTTTCTCAAACTGG
GTGGCGACCACCTCCT
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