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Stock
Name | Type | Details |
Pima S-7 x Empire, F2 | population | Alias: | PE-F2 | Description: | genetic mapping | Population size: | 108-150 | Secondary id: | cdbpop_000031 |
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Publication
Year | Publications |
1994 | Reinisch A, Dong J, Brubaker C, Stelly D, Wendel J, Paterson A. A detailed RFLP map of cotton, Gossypium hirsutum X Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. Genetics. 1994 Nov; 138(3):829-847. |
1998 | Wright R, Thaxton P, El-Zik K, Paterson A. D-subgenome bias of Xcm resistance genes in tetraploid gossypium (cotton) suggests that polyploid formation has created novel avenues for evolution. Genetics. 1998 Aug; 149(4):1987-1996 |
1999 | Wright R, Thaxton P, El-Zik K, Paterson A. Molecular mapping of genes affecting pubescence of cotton. Journal of heredity. 1999 Jan/Feb; 90(1):215-219. |
Map Loci
This map contains 254 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Pima S-7 x Empire, F2 (2007).chr01 | A1686 | A1686 | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr01 | Coau2C11 | Coau2C11 | marker_locus | 2.5 cM |
Pima S-7 x Empire, F2 (2007).chr01 | A1593 | A1593a | marker_locus | 5 cM |
Pima S-7 x Empire, F2 (2007).chr01 | pGH618 | pGH618 | marker_locus | 6.9 cM |
Pima S-7 x Empire, F2 (2007).chr01 | A1204 | A1204 | marker_locus | 21.7 cM |
Pima S-7 x Empire, F2 (2007).chr01 | pAR0077 | pAR0077a | marker_locus | 48.6 cM |
Pima S-7 x Empire, F2 (2007).chr01 | G1099 | G1099a | marker_locus | 48.6 cM |
Pima S-7 x Empire, F2 (2007).chr01 | G1097 | G1097 | marker_locus | 50 cM |
Pima S-7 x Empire, F2 (2007).chr01 | pGH468 | pGH468a | marker_locus | 55.9 cM |
Pima S-7 x Empire, F2 (2007).chr02 | pAR0390 | pAR0390 | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr02 | pGH399 | pGH399 | marker_locus | 27.3 cM |
Pima S-7 x Empire, F2 (2007).chr03 | G1129 | G1129a | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr03 | PXP3-89 | PXP3-89 | marker_locus | 17.2 cM |
Pima S-7 x Empire, F2 (2007).chr03 | G1164 | G1164 | marker_locus | 25.3 cM |
Pima S-7 x Empire, F2 (2007).chr03 | A1145 | A1145 | marker_locus | 46.2 cM |
Pima S-7 x Empire, F2 (2007).chr03 | P09-53 | P09-53a | marker_locus | 57.4 cM |
Pima S-7 x Empire, F2 (2007).chr03 | pAR04-14 | pAR4-14a | marker_locus | 73.6 cM |
Pima S-7 x Empire, F2 (2007).chr03 | pAR0172 | pAR0172a | marker_locus | 82.7 cM |
Pima S-7 x Empire, F2 (2007).chr03 | pGH639 | PGH639a | marker_locus | 108.8 cM |
Pima S-7 x Empire, F2 (2007).chr04 | A1172 | A1172 | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr04 | G1033 | G1033 | marker_locus | 3.7 cM |
Pima S-7 x Empire, F2 (2007).chr04 | M16-125 | M16-125 | marker_locus | 25 cM |
Pima S-7 x Empire, F2 (2007).chr04 | pAR0966 | pAR0966 | marker_locus | 26 cM |
Pima S-7 x Empire, F2 (2007).chr04 | pGH407 | PGH407 | marker_locus | 52.5 cM |
Pima S-7 x Empire, F2 (2007).chr04 | pGH559 | pGH559a | marker_locus | 81.6 cM |
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Map QTL
This map contains 13 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Pima S-7 x Empire, F2 (2007).chr05 | qBBR.PE-ch5 | QTL | 96.5 cM | 106.9 cM | - |
Pima S-7 x Empire, F2 (2007).chr07 | qDTL.PE-ch7 | QTL | 130.5 cM | 145.4 cM | - |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | qBBR.PE-ch21 | QTL | 20.2 cM | 27.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr23 | qDTL.PE-ch23 | QTL | 76.1 cM | 81 cM | - |
Pima S-7 x Empire, F2 (2007).chr25 | qDTL.PE-ch25.2 | QTL | 0 cM | 5.2 cM | - |
Pima S-7 x Empire, F2 (2007).chr01 | qDTL.PE-ch1 | QTL | 8 cM | 13.2 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.1 | QTL | 44.9 cM | 54.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.2 | QTL | 46.5 cM | 88.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.3 | QTL | 68.1 cM | 78 cM | - |
Pima S-7 x Empire, F2 (2007).chr14 | qBBR.PE-ch14.2 | QTL | 69 cM | 89.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr14 | qBBR.PE-ch14.1 | QTL | 86.3 cM | 93.7 cM | - |
Pima S-7 x Empire, F2 (2007).chr20 | qBBR.PE-ch20 | QTL | 37 cM | 45.8 cM | - |
Pima S-7 x Empire, F2 (2007).chr25 | qDTL.PE-ch25.1 | QTL | 0 cM | 4.9 cM | - |
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