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Stock
Name | Type | Details |
Pima S-7 x Empire, F2 | population | Alias: | PE-F2 | Description: | genetic mapping | Population size: | 108-150 | Secondary id: | cdbpop_000031 |
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Publication
Year | Publications |
1994 | Reinisch A, Dong J, Brubaker C, Stelly D, Wendel J, Paterson A. A detailed RFLP map of cotton, Gossypium hirsutum X Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. Genetics. 1994 Nov; 138(3):829-847. |
1998 | Wright R, Thaxton P, El-Zik K, Paterson A. D-subgenome bias of Xcm resistance genes in tetraploid gossypium (cotton) suggests that polyploid formation has created novel avenues for evolution. Genetics. 1998 Aug; 149(4):1987-1996 |
1999 | Wright R, Thaxton P, El-Zik K, Paterson A. Molecular mapping of genes affecting pubescence of cotton. Journal of heredity. 1999 Jan/Feb; 90(1):215-219. |
Map Loci
This map contains 254 marker loci:
Linkage Group | Marker Name | Locus Name | Type | Position |
Pima S-7 x Empire, F2 (2007).chr20 | pAR0430 | pAR0430 | marker_locus | 35.8 cM |
Pima S-7 x Empire, F2 (2007).chr20 | pAR0827 | pAR0827 | marker_locus | 45.8 cM |
Pima S-7 x Empire, F2 (2007).chr20 | G1104 | G1104 | marker_locus | 66.1 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0044 | pAR0044b | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0566 | pAR0566 | marker_locus | 5.4 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0111 | pAR0111b | marker_locus | 11.5 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | M16-040 | M16-040 | marker_locus | 21.8 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pGH745 | pGH745 | marker_locus | 27.5 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | A1296 | A1296 | marker_locus | 108.1 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0038 | pAR0038 | marker_locus | 125.9 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pGH505 | pGH505 | marker_locus | 142.7 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0944 | pAR0944b | marker_locus | 175.7 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR04-34 | pAR4-34b | marker_locus | 178.4 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | P01-42 | P01-42 | marker_locus | 202.7 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | pAR0570 | pAR0570b | marker_locus | 204.4 cM |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | P06-57 | P06-57 | marker_locus | 226.3 cM |
Pima S-7 x Empire, F2 (2007).chr22 | pGH286 | pGH286 | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr22 | pAR0138 | pAR0138b | marker_locus | 7.7 cM |
Pima S-7 x Empire, F2 (2007).chr22 | G1058 | G1058b | marker_locus | 8.9 cM |
Pima S-7 x Empire, F2 (2007).chr22 | pAR0711 | pAR0711 | marker_locus | 46 cM |
Pima S-7 x Empire, F2 (2007).chr22 | pAR0206 | pAR0206c | marker_locus | 55.2 cM |
Pima S-7 x Empire, F2 (2007).chr22 | A1535 | A1535b | marker_locus | 56.1 cM |
Pima S-7 x Empire, F2 (2007).chr23 | pAR0547 | pAR0547 | marker_locus | 0 cM |
Pima S-7 x Empire, F2 (2007).chr23 | pAR0257 | pAR0257 | marker_locus | 9.3 cM |
Pima S-7 x Empire, F2 (2007).chr23 | P12-12 | P12-12 | marker_locus | 21.9 cM |
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Map QTL
This map contains 13 QTL:
Linkage Group | Name | Type | Start | Stop | Peak |
Pima S-7 x Empire, F2 (2007).chr05 | qBBR.PE-ch5 | QTL | 96.5 cM | 106.9 cM | - |
Pima S-7 x Empire, F2 (2007).chr07 | qDTL.PE-ch7 | QTL | 130.5 cM | 145.4 cM | - |
Pima S-7 x Empire, F2 (2007).chr21/lgD02 | qBBR.PE-ch21 | QTL | 20.2 cM | 27.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr23 | qDTL.PE-ch23 | QTL | 76.1 cM | 81 cM | - |
Pima S-7 x Empire, F2 (2007).chr25 | qDTL.PE-ch25.2 | QTL | 0 cM | 5.2 cM | - |
Pima S-7 x Empire, F2 (2007).chr01 | qDTL.PE-ch1 | QTL | 8 cM | 13.2 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.1 | QTL | 44.9 cM | 54.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.2 | QTL | 46.5 cM | 88.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr06 | qDTL.PE-ch6.3 | QTL | 68.1 cM | 78 cM | - |
Pima S-7 x Empire, F2 (2007).chr14 | qBBR.PE-ch14.2 | QTL | 69 cM | 89.5 cM | - |
Pima S-7 x Empire, F2 (2007).chr14 | qBBR.PE-ch14.1 | QTL | 86.3 cM | 93.7 cM | - |
Pima S-7 x Empire, F2 (2007).chr20 | qBBR.PE-ch20 | QTL | 37 cM | 45.8 cM | - |
Pima S-7 x Empire, F2 (2007).chr25 | qDTL.PE-ch25.1 | QTL | 0 cM | 4.9 cM | - |
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