Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	JESPR0270	JESPR270a	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	A1719	A1719a	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	BNL0840	BNL840a	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	BNL1669	BNL1669a	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	BNL3510	BNL3510b	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0039	CIR039	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0143	CIR143a	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0391	CIR391	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	E2M5_85	E2M5_85	marker_locus	132.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0235	CIR235d	marker_locus	133.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	E4M5_69	E4M5_69	marker_locus	133.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	BNL3599	BNL3599a	marker_locus	137 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	E8M2_173	E8M2_173	marker_locus	138.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0233	CIR233	marker_locus	140.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0167	CIR167	marker_locus	151.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	NAU1274	NAU1274	marker_locus	155 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	At30	At30	marker_locus	157.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	pGH331	pGH331b	marker_locus	163.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	pAR0177	pAR177b	marker_locus	179 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	CIR0170	CIR170	marker_locus	191.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).NL5	E1M7_103	E1M7_103	marker_locus	0 cM
Guazuncho-2 x VH8-4602, BC1 (2005).NL5	E1M7_380	E1M7_380	marker_locus	19.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).NL5	E5M7_190	E5M7_190	marker_locus	31.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).NL5	E7M7_184	E7M7_184	marker_locus	43.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).NL5	E7M7_208	E7M7_208	marker_locus	53 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qMIC.GV-BC1_ch08	QTL	171.6 cM	175.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.1	QTL	23.7 cM	35.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.2	QTL	25.2 cM	26.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	qFM.GV-BC1_ch02	QTL	162.8 cM	163.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr22	qFM.GV-BC1_ch22	QTL	130.3 cM	131.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qFM.GV-BC1_ch03	QTL	28.7 cM	36.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qFM.GV-BC1_ch05	QTL	176.9 cM	177.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qFM.GV-BC1_ch06	QTL	0 cM	6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qFM.GV-BC1_ch08	QTL	168.6 cM	179.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03	qDTS.GV-BC1_ch24	QTL	136.8 cM	149.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTS.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	qUHML.GV-BC1_ch01	QTL	215.2 cM	216.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.1	QTL	37.6 cM	63.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.2	QTL	40.7 cM	48.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qUHML.GV-BC1_ch20	QTL	263.1 cM	264.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qUHML.GV-BC1_ch21	QTL	194.8 cM	195.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qUHML.GV-BC1_ch25	QTL	-0.5 cM	0.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.1	QTL	56.7 cM	98.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.2	QTL	133.3 cM	138.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.1	QTL	53.1 cM	67.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.2	QTL	120 cM	132 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.1	QTL	26.3 cM	43.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.2	QTL	258 cM	259 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qUHML.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)