Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	BNL3441	BNL3441	marker_locus	39.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	CIR0058	CIR058	marker_locus	39.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E2M7_310	E2M7_310	marker_locus	41 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E7M6_328	E7M6_328	marker_locus	41 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	BNL3627	BNL3627b	marker_locus	41 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	BNL1059	BNL1059b	marker_locus	41 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E1M2_450	E1M2_450	marker_locus	42.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E6M5_161	E6M5_161	marker_locus	42.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E5M8_143	E5M8_143	marker_locus	52.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E5M3_450	E5M3_450	marker_locus	53.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E5M8_87	E5M8_87	marker_locus	53.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E7M4_185	E7M4_185	marker_locus	55.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E8M1_400	E8M1_400	marker_locus	55.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E8M5_155	E8M5_155	marker_locus	61.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	A1145	A1145	marker_locus	67.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	BNL0226	BNL226b	marker_locus	82.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E4M8_79	E4M8_79	marker_locus	90.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	BNL3989	BNL3989	marker_locus	90.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	E5M3_320	E5M3_320	marker_locus	94.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	CIR0245	CIR245a	marker_locus	94.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	G1164	G1164a	marker_locus	95.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	CIR0332	CIR332	marker_locus	95.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	CIR0212	CIR212a	marker_locus	103.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	CIR0263	CIR263	marker_locus	103.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	pAR0815	pAR815a	marker_locus	105.2 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qHS.GV-BC1_ch05.1	QTL	18.5 cM	37.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qHS.GV-BC1_ch05.2	QTL	325.8 cM	347.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qHS.GV-BC1_ch06	QTL	132.9 cM	176.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr09	qHS.GV-BC1_ch09	QTL	256.9 cM	257.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	qDTLn.GV-BC1_ch01	QTL	214.1 cM	215.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qDTLn.GV-BC1_ch13.1	QTL	132.9 cM	149.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qDTLn.GV-BC1_ch13.2	QTL	139.3 cM	146.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qDTLn.GV-BC1_ch21	QTL	189.3 cM	201.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTLn.GV-BC1_ch06.1	QTL	139 cM	154 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTLn.GV-BC1_ch06.2	QTL	136.6 cM	149.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr17	qDTL.GV-BC1_ch17	QTL	22.5 cM	23.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qDTL.GV-BC1_ch21.1	QTL	30.8 cM	31.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qDTL.GV-BC1_ch21.2	QTL	277 cM	278 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03	qDTL.GV-BC1_ch24	QTL	130.8 cM	151.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTL.GV-BC1_ch06	QTL	144 cM	149 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr10	qMIC.GV-BC1_ch10	QTL	-0.1 cM	19.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08	qMIC.GV-BC1_ch19.1	QTL	114 cM	115 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr19/lgD08	qMIC.GV-BC1_ch19.2	QTL	16.8 cM	17.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qMIC.GV-BC1_ch21	QTL	122.5 cM	123.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr22	qMIC.GV-BC1_ch22	QTL	130.3 cM	131.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qMIC.GV-BC1_ch23	QTL	173.9 cM	174.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03	qMIC.GV-BC1_ch24	QTL	29 cM	49 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qMIC.GV-BC1_ch03.1	QTL	31.4 cM	38.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qMIC.GV-BC1_ch03.2	QTL	46.1 cM	71.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qMIC.GV-BC1_ch06	QTL	0 cM	4 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)