Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL3255	BNL3255d	marker_locus	79.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	A1412	A1412	marker_locus	79.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL2961	BNL2961a	marker_locus	87.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E1M5_85	E1M5_85	marker_locus	109.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	pAR0785	pAR785b	marker_locus	115.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E1M3_270	E1M3_270	marker_locus	123.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E2M6_322	E2M6_322	marker_locus	141.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E8M2_204	E8M2_204	marker_locus	156.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E7M2_156	E7M2_156	marker_locus	168.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL3792	BNL3792	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL3474	BNL3474a	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL3257	BNL3257	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL3255	BNL3255c	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	BNL1017	BNL1017b	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E5M6_145	E5M6_145	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E3M1_212	E3M1_212	marker_locus	170.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	CIR0209	CIR209	marker_locus	171.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E1M7_219	E1M7_219	marker_locus	174.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	CIR0324	CIR324	marker_locus	177.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E8M5_430	E8M5_430	marker_locus	177.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E5M4_410	E5M4_410	marker_locus	177.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E6M6_550	E6M6_550	marker_locus	178.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E7M5_95	E7M5_95	marker_locus	180 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E3M2_250	E3M2_250	marker_locus	180 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	E1M5_167	E1M5_167	marker_locus	180 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qMIC.GV-BC1_ch08	QTL	171.6 cM	175.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.1	QTL	23.7 cM	35.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.2	QTL	25.2 cM	26.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	qFM.GV-BC1_ch02	QTL	162.8 cM	163.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr22	qFM.GV-BC1_ch22	QTL	130.3 cM	131.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qFM.GV-BC1_ch03	QTL	28.7 cM	36.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qFM.GV-BC1_ch05	QTL	176.9 cM	177.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qFM.GV-BC1_ch06	QTL	0 cM	6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qFM.GV-BC1_ch08	QTL	168.6 cM	179.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03	qDTS.GV-BC1_ch24	QTL	136.8 cM	149.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTS.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	qUHML.GV-BC1_ch01	QTL	215.2 cM	216.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.1	QTL	37.6 cM	63.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.2	QTL	40.7 cM	48.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qUHML.GV-BC1_ch20	QTL	263.1 cM	264.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qUHML.GV-BC1_ch21	QTL	194.8 cM	195.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qUHML.GV-BC1_ch25	QTL	-0.5 cM	0.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.1	QTL	56.7 cM	98.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.2	QTL	133.3 cM	138.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.1	QTL	53.1 cM	67.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.2	QTL	120 cM	132 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.1	QTL	26.3 cM	43.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.2	QTL	258 cM	259 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qUHML.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)