Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	CIR0196	CIR196	marker_locus	23.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E6M3_93	E6M3_93	marker_locus	23.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E2M5_410	E2M5_410	marker_locus	33.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	CIR0003	CIR003	marker_locus	40.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	CMS0037	CMS37a	marker_locus	43.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	CG03	CG03d	marker_locus	45 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL1066	BNL1066	marker_locus	46.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL0836	BNL836	marker_locus	67.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E8M1_500	E8M1_500	marker_locus	69.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL3649	BNL3649b	marker_locus	77.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E4M2_216	E4M2_216	marker_locus	79.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL3592	BNL3592	marker_locus	86.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL1408	BNL1408	marker_locus	86.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E6M8_260	E6M8_260	marker_locus	86.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E6M2_65	E6M2_65	marker_locus	86.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E3M5_145	E3M5_145	marker_locus	88.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E1M5_247	E1M5_247	marker_locus	92.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	CIR0207	CIR207b	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	BNL2895	BNL2895b	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E6M5_106	E6M5_106	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E5M5_222	E5M5_222	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E4M3_97	E4M3_97	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E1M6_382	E1M6_382	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E1M2_460	E1M2_460	marker_locus	92.6 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	E3M8_218	E3M8_218	marker_locus	93.9 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qMIC.GV-BC1_ch08	QTL	171.6 cM	175.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.1	QTL	23.7 cM	35.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFM.GV-BC1_ch18.2	QTL	25.2 cM	26.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	qFM.GV-BC1_ch02	QTL	162.8 cM	163.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr22	qFM.GV-BC1_ch22	QTL	130.3 cM	131.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qFM.GV-BC1_ch03	QTL	28.7 cM	36.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qFM.GV-BC1_ch05	QTL	176.9 cM	177.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qFM.GV-BC1_ch06	QTL	0 cM	6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr08/lgA02	qFM.GV-BC1_ch08	QTL	168.6 cM	179.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr24/lgD03	qDTS.GV-BC1_ch24	QTL	136.8 cM	149.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qDTS.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr01	qUHML.GV-BC1_ch01	QTL	215.2 cM	216.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.1	QTL	37.6 cM	63.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qUHML.GV-BC1_ch13.2	QTL	40.7 cM	48.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr20	qUHML.GV-BC1_ch20	QTL	263.1 cM	264.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qUHML.GV-BC1_ch21	QTL	194.8 cM	195.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qUHML.GV-BC1_ch25	QTL	-0.5 cM	0.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.1	QTL	56.7 cM	98.7 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qUHML.GV-BC1_ch26.2	QTL	133.3 cM	138.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.1	QTL	53.1 cM	67.1 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qUHML.GV-BC1_ch03.2	QTL	120 cM	132 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.1	QTL	26.3 cM	43.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qUHML.GV-BC1_ch05.2	QTL	258 cM	259 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr06	qUHML.GV-BC1_ch06	QTL	138.1 cM	139.1 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)