CIR0324, CIR0324 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0324
AliasCIR324
Genbank IDAJ567263
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567263
Source Typegenomic
Repeat Motif(GT)8
PCR ConditionAnnealing temperature: 46
Primer 1CIR324_F: ATTGGTATTTCTCTGTG
Primer 2CIR324_R: ATATGAGTGCTGGGT
Product Length242
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567263
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567263AJ567263Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch08_At.08N/A177.2CIR324View
2DH962 x Jinmian-6, F2 (2009)AD_ch15_Dt.01N/A73.1CIR324View
3DH962 x Jinmian-6, F2 (2009)AD_ch15_Dt.01N/A73.1CIR324View
4AD-genome wide Reference Map (2009)AD_ch08_At.08N/A144cir0324View
Sequence
>CIR0324 ID=CIR0324; Name=CIR0324; organism=Gossypium hirsutum; type=genetic_marker; length=242bp
ATTGGTATTTCTCTGTGTGTGTGTGTGTGTTTCTTATGATTTAAGGGTTT
TTTCTTCATTTGAATTTAGTTTGANAAATGGAATCATCATTGTTCCATTT
GCCAGTCACTTGTGCACATNACTCATTTTCACTCATATTTTTGTTGTCAA
CCCTCTTCTTGCCAGGCCACATCACAACATTTTTTTCTTGAGTGCGACTG
CCCGCACGCAGGACATCATTATTATACACCCAGCACTCATAT