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Marker Overview
| Name | BNL3257 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3257_orig
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| Source Type | genomic |
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| Repeat Motif | (AC)13+(AT)10 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3257_F: CAATCTGGGATCAAAAAAACC |
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| Primer 2 | BNL3257_R: GGTGAAACATAGCGTGTTGC |
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| Polymorphism | P_ BNL3257 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch08_At.08 | N/A | 126.8 | BNL3257 | View |
| 2 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch08_At.08 | N/A | 170.6 | BNL3257 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch08_At.08 | N/A | 119.22 | BNL3257 | View |
| 4 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A08 | N/A | 18.9 | BNL3257 | View |
| 5 | Palmeri x K-101, F2 (2007) | AD_ch08_At.08 | N/A | 99.6 | BNL3257 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch08_At.08 | N/A | 162 | BNL3257 | View |
| 7 | TM-1 x 3-79, RIL (2012) | AD_ch08_At.08 | N/A | 56.08 | BNL3257 | View |
| 8 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch08_At.08 | N/A | 67.4 | BNL3257 | View |
| 9 | DH962 x Jinmian-6, F2 (2009) | AD_chU | N/A | 208.7 | BNL3257 | View |
| 10 | DH962 X Ji Mian 5, F2 (2015) | AD_ch08_At.08 | N/A | 52.6 | BNL3257 | View |
| 11 | TM-1 x 3-79, RIL (2014) | AD_ch08_At.08 | N/A | 66.5 | BNL3257 | View |
| 12 | DH962 x Ji Mian 5, RIL (2015) | AD_ch08_At.08 | N/A | 36.2 | BNL3257 | View |
| 13 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch08_At.08 | N/A | 57.6 | BNL3257 | View |
| 14 | Monsanto SSR Bin Map, (2009) | AD_ch08_At.08 | N/A | 101 | BNL3257 | View |
| 15 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch08_At.08 | N/A | 206.7 | BNL3257* | View |
| 16 | HS-46 x MARCABUCAG8US-1-88, RIL (2009) | AD_ch08_At.08 | N/A | 0 | BNL3257-206 | View |
| 17 | TM-1 x Hai-7124, BC1 (2007) | AD_ch08_At.08 | N/A | 57.1 | BNL3257-205 | View |
| 18 | TM-1 x Hai-7124, BC1 (2008) | AD_ch08_At.08 | N/A | 69.71 | BNL3257-205 | View |
| 19 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch08_At.08 | N/A | 7.4 | BNL3257-205 | View |
| 20 | TM-1 x Hai-7124, BC1 (2012) | AD_ch08_At.08 | N/A | 64.8 | BNL3257-205 | View |
| 21 | TM-1 x 3-79, RIL (2012.v3) | AD_ch08_At.08 | N/A | 66.45 | BNL3257 | View |
Sequence
>BNL3257 ID=BNL3257; Name=BNL3257; organism=Gossypium hirsutum; type=genetic_marker; length=214bp
CAATCTGGGATCAAAAAAACCATAAGTACCAATCTAGGAGAAGTAGACAA
GTTCAGGTACTAATTTTATATTTAACTTTTTTTTCTTTTTTAATGCGATT
ACTAGGTTTTTCTAATTTGTTTTAACACACACACACACACACACACACAC
ATATGATATATATATATATATATATATCATATTTTACAATTTTAGCAACA
CGCTATGTTTCACC
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