Guazuncho-2 x VH8-4602, BC1 (2005)

Map Overview


Name	Guazuncho-2 x VH8-4602, BC1 (2005)
Species	Gossypium hirsutum x barbadense
Population type	BC1
Source url	http://tropgenedb.cirad.fr/tropgene/JSP/index.jsp
Genome group	AD
Map type	genetic
Map unit	cM
Maternal parent	Guazuncho-2
Paternal parent	VH8-4602
Population size	75
Number of loci	1274
Number of QTL	149
Number of linkage groups	27
Publication	[view all]
Contact	TropGene

Stock

Name

Type

Details

Guazuncho-2 x VH8-4602, BC1

population

Alias:	GV-BC1
Description:	genetic mapping
Population size:	75
Secondary id:	cdbpop_000018
Pedigree:	Guazuncho-2 / VH8-4602

Contact

Name

Details

TropGene

Country:

France

Publication


Year	Publications
2003	Lacape JM, Nguyen TB, Thibivilliers S, Bojinov B, Courtois B, Cantrell RG, Burr B, Hau B. A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population. Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 2003 Aug; 46(4):612-26.
2004	Nguyen TB, Giband M, Brottier P, Risterucci AM, Lacape JM. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theoretical and applied genetics. 2004 Jun; 109(1):167-75

Map Loci

This map contains 1,274 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	CG24	CG24c	marker_locus	58.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M6_500	E3M6_500	marker_locus	59.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	pAR0390	pAR390	marker_locus	61.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	CIR0401	CIR401	marker_locus	65.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M5_134	E2M5_134	marker_locus	65.9 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E5M8_630	E5M8_630	marker_locus	70.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M6_370	E2M6_370	marker_locus	76.8 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E5M7_440	E5M7_440	marker_locus	81.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	BNL3971	BNL3971	marker_locus	84.3 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E7M2_96	E7M2_96	marker_locus	85.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M6_224	E2M6_224	marker_locus	86.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E4M5_63	E4M5_63	marker_locus	90.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M8_470	E3M8_470	marker_locus	92.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M8_74	E2M8_74	marker_locus	92.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E7M1_138	E7M1_138	marker_locus	92.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M6_420	E2M6_420	marker_locus	95.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E2M6_500	E2M6_500	marker_locus	95.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M2_208	E3M2_208	marker_locus	95.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E5M8_460	E5M8_460	marker_locus	95.2 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E1M6_378	E1M6_378	marker_locus	97.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E8M1_420	E8M1_420	marker_locus	97.7 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E7M6_214	E7M6_214	marker_locus	102.4 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M7_78	E3M7_78	marker_locus	104.5 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M3_500	E3M3_500	marker_locus	106.1 cM
Guazuncho-2 x VH8-4602, BC1 (2005).chr02	E3M5_103	E3M5_103	marker_locus	111.8 cM

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Map QTL

This map contains 149 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qML.GV-BC1_ch21	QTL	194.8 cM	195.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qML.GV-BC1_ch23	QTL	173.9 cM	174.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qML.GV-BC1_ch25	QTL	39.4 cM	63.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qML.GV-BC1_ch26.1	QTL	66.6 cM	67.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr26	qML.GV-BC1_ch26.2	QTL	86.2 cM	87.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qML.GV-BC1_ch03.1	QTL	127.5 cM	128.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qML.GV-BC1_ch03.2	QTL	54.6 cM	55.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qML.GV-BC1_ch05	QTL	28 cM	29 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	qFS.GV-BC1_ch11	QTL	216.5 cM	217.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr13/lgA01	qFS.GV-BC1_ch13	QTL	175.5 cM	176.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr16	qFS.GV-BC1_ch16	QTL	122 cM	145 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFS.GV-BC1_ch18.1	QTL	47.2 cM	59.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFS.GV-BC1_ch18.2	QTL	109.2 cM	110.2 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr21/lgD02	qFS.GV-BC1_ch21	QTL	187.3 cM	203.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qFS.GV-BC1_ch23.1	QTL	152.3 cM	168.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qFS.GV-BC1_ch23.2	QTL	172.6 cM	173.6 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qFS.GV-BC1_ch23.3	QTL	163.4 cM	182.4 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr23	qFS.GV-BC1_ch23.4	QTL	106.3 cM	107.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr25	qFS.GV-BC1_ch25	QTL	46.9 cM	47.9 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr03	qFS.GV-BC1_ch03	QTL	80.5 cM	100.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qFS.GV-BC1_ch05.1	QTL	83.3 cM	108.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr05	qFS.GV-BC1_ch05.2	QTL	255.3 cM	256.3 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr11/lgA03	qFU.GV-BC1_ch11	QTL	216.5 cM	217.5 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr14	qFU.GV-BC1_ch14	QTL	81.8 cM	82.8 cM	-
Guazuncho-2 x VH8-4602, BC1 (2005).chr18	qFU.GV-BC1_ch18.1	QTL	57.7 cM	71.7 cM	-

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Guazuncho-2 x VH8-4602, BC1 (2005)