CIR0263, CIR0263 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCIR0263
AliasCIR263
Genbank IDAJ567208
TypeSSR
SpeciesGossypium hirsutum
GermplasmGuazuncho-2
Source SequenceAJ567208
Source Typegenomic
Repeat Motif(TG)4(N)3(TG)6(N)3(TG)4
PCR ConditionAnnealing temperature: 55
Primer 1CIR263_F: ACAGATGATGGATGGATAG
Primer 2CIR263_R: TTCAGGAGTTCAGCGT
Product Length90
PolymorphismP_ CIR0263
Publication[view all]
CommentPrimer data obtained in 2005
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankAJ567208
Germplasm
Stock NameType
Guazuncho-2accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
AJ567208AJ567208Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Emian-22 x 3-79, BC1 (2011)AD_ch03_At.03N/A60.1CIR263View
2Guazuncho-2 x VH8-4602, BC1 (2005)AD_ch03_At.03N/A103.9CIR263View
3Guazuncho-2 x VH8-4602, consensus (2009)AD_ch14_Dt.02N/A88.6CIR263View
4Guazuncho-2 x VH8-4602, consensus (2009)AD_ch03_At.03N/A80.74CIR263View
5Guazuncho-2 x VH8-4602, RIL (2009)AD_ch14_Dt.02N/A73.57CIR263View
6Guazuncho-2 x VH8-4602, RIL (2009)AD_ch03_At.03N/A54.29CIR263View
7AD-genome wide Reference Map (2009)AD_ch03_At.03N/A172cir0263View
8PD 94042 x (AD)4-08, F2 (2016)AD_ch03_At.03N/A83.3CIR263View
Sequence
>CIR0263 ID=CIR0263; Name=CIR0263; organism=Gossypium hirsutum; type=genetic_marker; length=90bp
ACAGATGATGGATGGATAGATGTGTGTGTATGTGTGTGTGTGCATGTGTG
TGGTACCTTGTTTTCAGAGTCTCCACGCTGAACTCCTGAA