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Marker Overview
| Name | BNL1059 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL1059_orig
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| Source Type | genomic |
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| Repeat Motif | (CA)16, (CA)11 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL1059_F: CCTTCTCTGACACTCTGCCC |
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| Primer 2 | BNL1059_R: TGTATTCTCTTCTTTTCCTTATACTTTT |
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| Polymorphism | P_ BNL1059 |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Acala-44 x Pima S-7, F2 (2004) | AD_chU | N/A | 71.9 | BNL1059 | View |
| 2 | Emian-22 x 3-79, BC1 (2011) | AD_ch14_Dt.02 | N/A | 40.75 | BNL1059 | View |
| 3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch14_Dt.02 | N/A | 55.85 | BNL1059 | View |
| 4 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch03_At.03 | N/A | 37.8 | BNL1059 | View |
| 5 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch14_Dt.02 | N/A | 51.63 | BNL1059 | View |
| 6 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch03_At.03 | N/A | 26.08 | BNL1059 | View |
| 7 | Palmeri x K-101, F2 (2007) | AD_ch14_Dt.02 | N/A | 71.1 | BNL1059 | View |
| 8 | AD-genome wide Reference Map (2009) | AD_ch14_Dt.02 | N/A | 111 | BNL1059 | View |
| 9 | AD-genome wide Reference Map (2009) | AD_ch03_At.03 | N/A | 109 | BNL1059 | View |
| 10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch14_Dt.02 | N/A | 118.6 | BNL1059 | View |
| 11 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch03_At.03 | N/A | 14.9 | BNL1059b | View |
| 12 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch03_At.03 | N/A | 41 | BNL1059b | View |
| 13 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch14_Dt.02 | N/A | 94.4 | BNL1059a | View |
| 14 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch14_Dt.02 | N/A | 68.7 | BNL1059a | View |
| 15 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch14_Dt.02 | N/A | 101.7 | BNL1059a | View |
| 16 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch03_At.03 | N/A | 131.8 | BNL1059b* | View |
| 17 | TM-1 x Hai-7124, BC1 (2008) | AD_ch14_Dt.02 | N/A | 67.23 | BNL1059-205 | View |
| 18 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch14_Dt.02 | N/A | 38 | BNL1059-205 | View |
| 19 | TM-1 x Hai-7124, BC1 (2007) | AD_ch14_Dt.02 | N/A | 67.7 | BNL1059-205 | View |
| 20 | TM-1 x Hai-7124, BC1 (2012) | AD_ch14_Dt.02 | N/A | 50 | BNL1059-205 | View |
| 21 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch17_Dt.03 | N/A | 225.6 | BNL1059 | View |
Sequence
>BNL1059 ID=BNL1059; Name=BNL1059; organism=Gossypium hirsutum; type=genetic_marker; length=216bp
CCTTCTCTGACACTCTGCCCAGTTGATAATATTAGTCACCAGTCCAAGGC
GATCTTCCTAGAACTATAAAGCTTATCAATGTATGCTATTACTGGGCGCG
ATGCTTCGATATACCTTCTCATTTTCTTCTCTGCTGTATGATCTGCACAC
ACACACACACACACACACACACACACATATATAGATTAAAAAGTATAAGG
AAAAGAAGAGAATACA
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