pGH331, pGH331 (genetic_marker) Gossypium hirsutum

Name	pGH331
Genbank ID	CA993864
Type	RFLP
Species	Gossypium hirsutum
Germplasm	TM-1
Source Type	cDNA
Restriction Enzyme	Pst1
Publication	[view all]

Database	Accession
DB:genbank	CA993864

Feature Name	Type	Location	Analysis	Reference
D12	chromosome	D12:3058427..3059263 +	Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1	n/a
CM018226.1	chromosome	CM018226.1:2979219..2980015 +	Gossypium barbadense (AD2) '3-79' genome HGS_v1.1	n/a
Dt_chr1	chromosome	Dt_chr1:37975998..37976834 +	Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1	n/a
D12	chromosome	D12:2869821..2870657 +	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	n/a
Ghir_D12	chromosome	Ghir_D12:3047136..3047971 +	Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1	n/a
D12	chromosome	D12:3004265..3005101 +	Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1	n/a
D12	chromosome	D12:3065320..3066154 +	Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1	n/a
D12	chromosome	D12:3048424..3049258 +	Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1	n/a
Dt12	chromosome	Dt12:3249353..3250149 +	Gossypium barbadense (AD2) '3-79' genome HAU_v1	n/a
scaffold15503	supercontig	scaffold15503:132744..133540 +	Gossypium barbadense (AD2) '3-79' genome HAU_v1	n/a
Gbar_D12	chromosome	Gbar_D12:2954147..2954943 +	Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1	n/a
D12	chromosome	D12:2894699..2895495 +	Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1	n/a
CM017634.1	chromosome	CM017634.1:2926884..2927718 +	Gossypium tomentosum (AD3) genome HGS_v1.1	n/a
CM017660.1	chromosome	CM017660.1:2873245..2874079 +	Gossypium mustelinum (AD4) genome JGI_v1.1	n/a
CM017712.1	chromosome	CM017712.1:2943853..2944649 +	Gossypium darwinii (AD5) genome HGS_v1.1	n/a
D12	chromosome	D12:3177226..3178062 +	Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1	n/a

Year

Publication

2004

Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417.

Stock Name	Type
TM-1	accession

#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Guazuncho-2 x VH8-4602, BC1 (2005)	AD_ch25_Dt.06	N/A	52.4	pGH331a	View
2	Guazuncho-2 x VH8-4602, BC1 (2005)	AD_ch26_Dt.12	N/A	163.7	pGH331b	View
3	Guazuncho-2 x VH8-4602, consensus (2009)	AD_ch26_Dt.12	N/A	114.28	pGH331	View
4	Guazuncho-2 x VH8-4602, consensus (2009)	AD_ch25_Dt.06	N/A	45.31	pGH331	View
5	Palmeri x K-101, F2 (2007)	AD_ch12_At.12	N/A	182.4	pGH331	View
6	AD-genome wide Reference Map (2009)	AD_ch25_Dt.06	N/A	42	pGH331	View
7	TM-1 x WT-936, F2 (2005)	AD_ch12_At.12	N/A	55.9	pGH331	View
8	Guazuncho-2 x VH8-4602, RIL (2009)	AD_ch26_Dt.12	N/A	62.12	pGH331	View
9	Pima S-7 x im, F2 (2007)	AD_ch12_At.12	N/A	213.8	pGH331	View
10	AD-genome wide Reference Map (2009)	AD_ch12_At.12	N/A	206	pGH331	View
11	AD-genome wide Reference Map (2009)	AD_ch26_Dt.12	N/A	16	pGH331	View
12	TM-1 x WT-936, F2 (2005)	AD_ch26_Dt.12	N/A	195.8	pGH331	View
13	TM-1 x WT-936, F2 (2005)	AD_ch26_Dt.12	N/A	198.2	pGH331	View
14	PD 94042 x (AD)4-08, F2 (2016)	AD_ch12_At.12	N/A	60.3	pGH331b	View